G465316


Basic Information

Item Value
gene id G465316
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 2317355 ~ 2317729 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU528444
ccggtgaacaggccaGGGTTCCAtaaccgcaggcagaacagttgaaactggagcagcagcacgaccaggtggactggggacagcaaggagtcatcatgccaggtagtaatgaggcatggttctagggctcaggtcctctgagagagagaaagaaagagagaaagagagaattagagagagcacacttaaattcacacaggacaccggataagacaggagaagtactccagatataacaaactgaccctagccccccgacacataaactactgcagcataaatactggaggctgagacaggacgggtcaggagacactgtggccccatccgatgatacccccggacagggccaaacaggaaggatataaccccacc

Function

NR:

description
ZK1236.4, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU528444 True 375 lncRNA 0.52 1 2317355 2317729

Neighbor

gene id symbol gene type direction distance location
LOC110525063 LOC106570939 coding upstream 117461 2149240 ~ 2199894 (+)
LOC110525062 LOC106570947 coding upstream 212214 2002088 ~ 2105141 (+)
slc4a4a LOC101484802 coding upstream 1198766 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 1315067 997029 ~ 1002288 (+)
tars1 LOC106585996 coding upstream 1714836 564277 ~ 602519 (+)
zfr zfr coding downstream 40893 2342330 ~ 2451362 (+)
mtmr12 mtmr12 coding downstream 92502 2410231 ~ 2446470 (+)
LOC110525158 LOC106570936 coding downstream 148745 2466474 ~ 2489239 (+)
pdzd2 pdzd2 coding downstream 235482 2553211 ~ 2714300 (+)
LOC110516346 NA coding downstream 406036 2723765 ~ 2724931 (+)
G465315 NA non-coding upstream 36 2316947 ~ 2317319 (+)
G465314 NA non-coding upstream 15092 2301980 ~ 2302263 (+)
G465311 NA non-coding upstream 17425 2297098 ~ 2299930 (+)
G465306 NA non-coding upstream 30265 2286837 ~ 2287090 (+)
G465301 NA non-coding upstream 42275 2274873 ~ 2275080 (+)
G465318 NA non-coding downstream 4709 2322438 ~ 2322681 (+)
G465353 NA non-coding downstream 76753 2394482 ~ 2475063 (+)
G465354 NA non-coding downstream 83775 2401504 ~ 2403046 (+)
G465362 NA non-coding downstream 103109 2420838 ~ 2424505 (+)
G465203 NA other upstream 253288 2062328 ~ 2064067 (+)
G464705 NA other upstream 1088256 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 1858349 442716 ~ 549899 (+)
G463813 NA other upstream 2049204 265409 ~ 268151 (+)
LOC118964799 isca1 other upstream 2264865 43896 ~ 52580 (+)
G465355 NA other downstream 87390 2405119 ~ 2406090 (+)
LOC110525071 LOC106585963 other downstream 487654 2743964 ~ 2866482 (+)
G465578 NA other downstream 661113 2978842 ~ 2982425 (+)
G466813 NA other downstream 1455135 3772864 ~ 3773340 (+)

Expression


Co-expression Network