Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_024012 |
| gene name | pth1a |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007136.7 |
| NCBI id | CM002909.2 |
| chromosome length | 37502051 |
| location | 17860798 ~ 17861696 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| pth1a | Enables hormone activity. Acts upstream of or within calcium ion homeostasis and epidermal cell differentiation. Predicted to be located in extracellular region. Is expressed in several structures, including gill; heart; integument; nervous system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in several diseases, including chronic kidney disease; diabetes mellitus (multiple); familial isolated hypoparathyroidism; hyperphosphatemia; and secondary hyperparathyroidism. Orthologous to human PTH (parathyroid hormone). |
| id | name | namespace |
|---|---|---|
| GO:0009913 | epidermal cell differentiation | biological_process |
| GO:0055074 | calcium ion homeostasis | biological_process |
| GO:0006874 | cellular calcium ion homeostasis | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005179 | hormone activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040623-1 | Enables hormone activity. Acts upstream of or within calcium ion homeostasis and epidermal cell differentiation. Predicted to be located in extracellular region. Is expressed in several structures, including gill; heart; integument; nervous system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in several diseases, including chronic kidney disease; diabetes mellitus (multiple); familial isolated hypoparathyroidism; hyperphosphatemia; and secondary hyperparathyroidism. Orthologous to human PTH (parathyroid hormone). |
| ensembl_id | ENSDARG00000093738 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00047660 | False | 676 | mRNA | 0.40 | 3 | 17860798 | 17861696 |
| TCONS_00047661 | True | 636 | mRNA | 0.39 | 2 | 17860962 | 17861695 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_024011 | PYURF | coding | upstream | 11224 | 17847054 ~ 17849574 (+) |
| XLOC_024010 | galnt18a | coding | upstream | 35284 | 17689565 ~ 17825514 (+) |
| XLOC_024009 | vac14 | coding | upstream | 247773 | 17589906 ~ 17613025 (+) |
| XLOC_024008 | NA | coding | upstream | 324882 | 17528781 ~ 17535916 (+) |
| XLOC_024007 | NA | coding | upstream | 350379 | 17502996 ~ 17510419 (+) |
| XLOC_024013 | btbd10a | coding | downstream | 642 | 17862338 ~ 17892830 (+) |
| XLOC_024014 | borcs5 | coding | downstream | 58665 | 17920361 ~ 17925146 (+) |
| XLOC_024015 | C25H12orf29 | coding | downstream | 63728 | 17925424 ~ 17934675 (+) |
| XLOC_024016 | tmtc3 | coding | downstream | 140672 | 18002368 ~ 18055064 (+) |
| XLOC_024017 | BX901919.1 | coding | downstream | 236051 | 18097747 ~ 18097861 (+) |
| XLOC_023973 | CR762411.1 | misc | upstream | 2642689 | 15217824 ~ 15218109 (+) |
| XLOC_024002 | NA | non-coding | upstream | 900297 | 16958172 ~ 16960501 (+) |
| XLOC_023998 | NA | non-coding | upstream | 1023849 | 16829884 ~ 16836949 (+) |
| XLOC_023997 | BX004976.1 | non-coding | upstream | 1088890 | 16771791 ~ 16771908 (+) |
| XLOC_024018 | NA | non-coding | downstream | 245696 | 18107392 ~ 18250076 (+) |
| XLOC_024019 | NA | non-coding | downstream | 447619 | 18309315 ~ 18314927 (+) |
| XLOC_024020 | NA | non-coding | downstream | 497332 | 18359028 ~ 18361288 (+) |
| XLOC_024027 | NA | non-coding | downstream | 882325 | 18744021 ~ 18745029 (+) |
