G465362


Basic Information

Item Value
gene id G465362
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 2420838 ~ 2424505 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU528508
cagatctactagcctgcctcccccagacagggctggtattaacacagatctactagcctgcatgccccagacagggctggtattaacacagatctactagcctgcctgccccagacagggctggtattaacacagatctactagtctctatgccccagacagggctggtattaacacagatctactagcctgcatgccccagacagggctggtattaacacagatctactagcctgcatgccccagacagggctggtattaacacagatctactagcctgcctgccccagacagggctggtattaacacagatctactagcctgcctgccccagacagggctggtattaacacagatctactagcctgcaagccccagacagggctggtattaacacagatctactagcctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU528508 True 412 lncRNA 0.53 2 2420838 2424505

Neighbor

gene id symbol gene type direction distance location
zfr zfr coding upstream 11577 2342330 ~ 2451362 (+)
LOC110525063 LOC106570939 coding upstream 220944 2149240 ~ 2199894 (+)
LOC110525062 LOC106570947 coding upstream 315697 2002088 ~ 2105141 (+)
slc4a4a LOC101484802 coding upstream 1302249 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 1418550 997029 ~ 1002288 (+)
LOC110525158 LOC106570936 coding downstream 41969 2466474 ~ 2489239 (+)
pdzd2 pdzd2 coding downstream 128706 2553211 ~ 2714300 (+)
LOC110516346 NA coding downstream 299260 2723765 ~ 2724931 (+)
LOC110525071 LOC106585963 coding downstream 319459 2743964 ~ 2866482 (+)
isl1 isl1 coding downstream 660176 3084681 ~ 3092690 (+)
G465354 NA non-coding upstream 17792 2401504 ~ 2403046 (+)
G465318 NA non-coding upstream 98157 2322438 ~ 2322681 (+)
G465316 NA non-coding upstream 103109 2317355 ~ 2317729 (+)
G465315 NA non-coding upstream 103519 2316947 ~ 2317319 (+)
G465314 NA non-coding upstream 118575 2301980 ~ 2302263 (+)
G465358 NA non-coding downstream 24147 2448652 ~ 2760109 (+)
G465378 NA non-coding downstream 51463 2475968 ~ 2480509 (+)
G465394 NA non-coding downstream 94305 2518810 ~ 2520811 (+)
G465451 NA non-coding downstream 222756 2647261 ~ 2649273 (+)
G465454 NA non-coding downstream 232236 2656741 ~ 2657202 (+)
G465355 NA other upstream 14748 2405119 ~ 2406090 (+)
G465203 NA other upstream 356771 2062328 ~ 2064067 (+)
G464705 NA other upstream 1191739 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 1961832 442716 ~ 549899 (+)
G465578 NA other downstream 554337 2978842 ~ 2982425 (+)
G466813 NA other downstream 1348359 3772864 ~ 3773340 (+)
G468732 NA other downstream 3683874 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 3770267 6194772 ~ 6199155 (+)

Expression


Co-expression Network