Gene
RNA
| Item | Value |
|---|---|
| gene id | G465358 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 2448652 ~ 2760109 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU528504 | True | 655 | lncRNA | 0.45 | 2 | 2448652 | 2760109 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mtmr12 | mtmr12 | coding | upstream | 2182 | 2410231 ~ 2446470 (+) |
| zfr | zfr | coding | upstream | 39391 | 2342330 ~ 2451362 (+) |
| LOC110525063 | LOC106570939 | coding | upstream | 248758 | 2149240 ~ 2199894 (+) |
| LOC110525062 | LOC106570947 | coding | upstream | 343511 | 2002088 ~ 2105141 (+) |
| slc4a4a | LOC101484802 | coding | upstream | 1330063 | 775664 ~ 1118589 (+) |
| isl1 | isl1 | coding | downstream | 324572 | 3084681 ~ 3092690 (+) |
| fst | fst | coding | downstream | 703560 | 3463669 ~ 3491741 (+) |
| LOC118964791 | NA | coding | downstream | 780257 | 3540366 ~ 3542885 (+) |
| hspb3 | hspb3 | coding | downstream | 1057929 | 3818038 ~ 3823330 (+) |
| LOC110513046 | snx18 | coding | downstream | 1067061 | 3827170 ~ 3866575 (+) |
| G465362 | NA | non-coding | upstream | 24147 | 2420838 ~ 2424505 (+) |
| G465354 | NA | non-coding | upstream | 45606 | 2401504 ~ 2403046 (+) |
| G465318 | NA | non-coding | upstream | 125971 | 2322438 ~ 2322681 (+) |
| G465316 | NA | non-coding | upstream | 130923 | 2317355 ~ 2317729 (+) |
| G465315 | NA | non-coding | upstream | 131333 | 2316947 ~ 2317319 (+) |
| G465526 | NA | non-coding | downstream | 45789 | 2805898 ~ 2806263 (+) |
| G465527 | NA | non-coding | downstream | 47451 | 2807560 ~ 2809159 (+) |
| G465535 | NA | non-coding | downstream | 65408 | 2825517 ~ 2828010 (+) |
| G465539 | NA | non-coding | downstream | 82238 | 2842347 ~ 2984390 (+) |
| G465541 | NA | non-coding | downstream | 89599 | 2849708 ~ 2850200 (+) |
| G465355 | NA | other | upstream | 42562 | 2405119 ~ 2406090 (+) |
| G465203 | NA | other | upstream | 384585 | 2062328 ~ 2064067 (+) |
| G464705 | NA | other | upstream | 1219553 | 1228705 ~ 1229099 (+) |
| LOC110525138 | rufy3 | other | upstream | 1989646 | 442716 ~ 549899 (+) |
| LOC110525071 | LOC106585963 | other | downstream | 45274 | 2743964 ~ 2866482 (+) |
| G465578 | NA | other | downstream | 218733 | 2978842 ~ 2982425 (+) |
| G466813 | NA | other | downstream | 1012755 | 3772864 ~ 3773340 (+) |
| G468732 | NA | other | downstream | 3348270 | 6108379 ~ 6156681 (+) |
| G468643 | LOC106607869 | other | downstream | 3434663 | 6194772 ~ 6199155 (+) |
