XLOC_024013 (btbd10a)


Basic Information

Item Value
gene id XLOC_024013
gene name btbd10a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 17862338 ~ 17892830 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047662
GCGATATCCGACTTAGCCTTGTAGCTTCCCATATATGTCAACAATGAACACCATCGTGAATGATGAAGATCAAGCTCAAGTAGATTCATGGAACGGCTAATGTTTGTTAAATAGCTTCAGCGTACACTTCGTGGAGGACGTTCAGCGTTAGGAAGAGACAGGATATGAGATCTGAAAGCCTTTCAGTCCAGTATTATCAACTCTTTTGAGATGGCAGCACACCCTGTCTCTTATGACAGCCATTCGAGCGATTCCGAAAATTGGGATCAAAGTACAACTTGTCGGTCTAGAAGAGTCTGCAGACGCCTCAGtGGTCAGCCGCGTGGAGCTCATCTGGAAGGTGATCTACTCAACATGAGTCTGCATGGAGCCAGTGGAGGAGCAGGAGCCCTGGAGCAGCACAGAGAGAGGAGGAGGTCTGGAGACCGCTCCAGAGACTCTTCACATGACAGAGGAGAGGGTCAGCTCACTCCTTGCATCAGGAACGTCACCTCACCCATACGCCAGACCCTCGGCGAGCGTGAGCGGGACTCAGGCTGCTCATCGCGCTCCACCAGTCCCAGGCCTCAGAAAGCATGCTCCTCCAGTCTCTTCTACACCGACTCCCATGGAAAAACCCACAGCTCCGACATGATCTATGTCTGCGAAAACCTCAAAGAGGGCCCTCGCAGTTTGAGGACTGCTGAAAGAGTCACTCTGATTGTAGACAACACTCGTTTCGTGGTCGATCCATCCATCTTCACCGCTCAACCCAACACCATGCTTGGCAGGATGTTCGGATCTGGACGGGAACACAACTTCACGCGTCCTAATGAAAAGGGAGAGTATGAGGTTGCAGAGGGAATCAGCTCCACTGTGTTCAGAGCCATTTTGGATTACTATAAATCGGGGATAATCCGCTGCCCTGATGGGATCTCCATCCCGGAGCTGAGAGAAGCATGTGACTACCTCTGCATCGCCTTCGACTACAGCACCATCAAGTGCAGAGACCTCAGTGCCCTCATGCACGAGCTGTCTAATGACGGCGCACGGCGGCAGTTTGAGTTCTATCTGGAGGAGATGGTGCTGCCGCTGATGGTGGCCAGTGCTCAGAGCGGAGAGAGAGAGTGTCATGTGGTGGTGCTGACGGATGATGACGTGGTGGACTGGGATGAGGAGTACCCACCGCAGATGGGAGAGGAGTACTCACAGATTATATACAGCACAAAACTCTACCGGTTCTTCAAATACATTGAAAACCGAGATGTTGCCAAGTCTGTTCTGAAGGAGAGAGGACTGAAGAAAATTCGATTAGGCATTGAAGGATACCCAACCTACAAAGAAAAAGTGAAGAAGCGTCCTGGCGGCCGTCCCGAGGTCATCTACAACTACGTCCAGCGGCCCTTTATCCGCATGTCCTGGGAGAAAGAGGAGGGCAAAAGCAGACACGTGGACTTTCAGTGTGTGAAGAGCAAGTCAATCACTAACCTGGCTGCAGCGGCGGCAGACATTCCTCAGGACCAGCTGGTGGTGATGCATCCTGGGCCACAGGTGGACGAACTCGACATCCTCCCAAACCACCCACAGCCCAGCCAACATTATGAGCCCGATCCTGACGCCTCGTCCCCAGCCAtctgaccctcacacacacacacacaaacacacactccactGGTCCCGCTGCCAAGACCGCATTGCCTTTCTAGTCTCTCCCGCCTTACACGAGTCTTCAAGACAAGCACTGCGGCAGCACACCTCCTCCAGACACTCTTTCCTGGACACAACTCAGCCAAAGCAGGTTTTGATTTATTTGAGTAGATAATCAATGTTGATAATCACTCCTTACGTTCATTATTTAAGCAAAGCCATGCACTGGGGGGAAATGTACAAGTCAATAGTAACTTTGTcctaacattacattttttttttagatgaaaaattacaattttgaGTTGTAAAATACAATTTGAAGAAACAAAAGTCAGAATTAACCAGCTACTGCAAGACAAGTCAGATGTGAAAAAGGTGCAATTTTCATTATTCAGTcaaattaacaacaataataatagaacaATTGCAAGATGTAAACATCTGGAGAAAAAAAACGTCAAAACTGCCAATCTGAACTCATAAATTGGGTTTACGTCACACTTTTAACTCCTTGAATTGCAGTAGCAAAATTGCCAGAAATGCAAAATACAATGAGTTTTTAACTTGCAACTGTTAGAAAAAAAGGATAATTTAGAGAAACATGCAGTTCTGAAACTCGCAACGTTAAGTTGACATGAAAAAAAGAAAGTTCCAATTGGCGGATAAAAGCTTCATAGTTTGCTGTGGTATAAATAGAAGGATGAATGTGATGTATAGAGCTTCTTGTCCAGCATGTGACCCACTTTAAATTGTGTCTCACTCAGGCAGAGGAGATCATTGGACAAGGCAAAACACAACACAGTGAGTATAGAATGACATGAAACGCAGAGGCTGCTGACTCATCAATAAACACAGCAACCATCCATAAGGTCAGTCACAAATGTCAGGTGTATCAGCTGCCTTAATAAAGCTATCAACTTACATGTCACGACTCAATTGTGAGACTCACATAATGGCCAAAATAACCCTGCAACATGTAAACTATGAGCTTTTAACTTGCATTTAGGAGAGGGGTTGTTATGATATGAGTATGATGATATGAAAAGTAATTCTGATTTAAAGTCATAATGCAAGTTTAAACTAGAGCTTTctaacttaaaaacaaacaattgtgaTTTATAAAAGTCCCAattatcttttttatatatatatatatatatattatccgtGGACACCTGCTTTCATAGATTGTACTATATTTGTGGTGCTGTTTTGCTACTGCTGTTTCACTTTGCAATAAAAAGAAAAGGAGCACAATCCACTGAACAACCCTGCACATGTCCTGTGATGAAGCAGAATGCATTCGTTGTAGGTCTAGTGTGGTGGAGACGGTCTCACTGTGATGCTTGGCCTCTGAACGAGTACTGAAGTGATGTCACGTTTTTATTGTACcgtactttttattttactgtcatttgtagctgcagtgcagcgagagagagagagacgttcCTCTACTGCACCGctgacaaatgttattttaataaagcattgtTGGATCA
>TCONS_00047664
GCGATATCCGACTTAGCCTTGTAGCTTCCCATATATGTCAACAATGAACACCATCGTGAATGATGAAGATCAAGCTCAAGTAGATTCATGGAACGGCTAATGTTTGTTAAATAGCTTCAGCGTACACTTCGTGGAGGACGTTCAGCGTTAGGAAGAGACAGGATATGAGATCTGAAAGCCTTTCAGTCCAGTATTATCAACTCTTTTGAGATGGCAGCACACCCTGTCTCTTATGACAGCCATTCGAGCGATTCCGAAAATTGGGATCAAAGTACAACTTGTCGGTCTAGAAGAGTCTGCAGACGCCTCAGtGGTCAGCCGCGTGGAGCTCATCTGGAAGGTGATCTACTCAACATGAGTCTGCATGGAGCCAGTGGAGGAGCAGGAGCCCTGGAGCAGCACAGAGAGAGGAGGAGGTCTGGAGACCGCTCCAGAGACTCTTCACATGACAGAGGAGAGGGTCAGCTCACTCCTTGCATCAGGAACGTCACCTCACCCATACGCCAGACCCTCGGCGAGCGTGAGCGGGACTCAGGCTGCTCATCGCGCTCCACCAGTCCCAGGCCTCAGAAAGCATGCTCCTCCAGTCTCTTCTACACCGACTCCCATGGAAAAACCCACAGCTCCGACATGATCTATGTCTGCGAAAACCTCAAAGAGGGCCCTCGCAGTTTGAGGACTGCTGAAAGAGTCACTCTGATTGTAGACAACACTCGTTTCGTGGTCGATCCATCCATCTTCACCGCTCAACCCAACACCATGCTTGGCAGGATGTTCGGATCTGGACGGGAACACAACTTCACGCGTCCTAATGAAAAGGGAGAGTATGAGGTTGCAGAGGGAATCAGCTCCACTGTGTTCAGAGCCATTTTGGATTACTATAAATCGGGGATAATCCGCTGCCCTGATGGGATCTCCATCCCGGAGCTGAGAGAAGCATGTGACTACCTCTGCATCGCCTTCGACTACAGCACCATCAAGTGCAGAGACCTCAGTGCCCTCATGCACGAGCTGTCTAATGACGGCGCACGGCGGCAGTTTGAGTTCTATCTGGAGGAGATGGTGCTGCCGCTGATGGTGGCCAGTGCTCAGAGCGGAGAGAGAGAGTGTCATGTGGTGGTGCTGACGGATGATGACGTGGTGGACTGGGATGAGGAGTACCCACCGCAGATGGGAGAGGAGTACTCACAGATTATATACAGCACAAAACTCTACCGGTTCTTCAAATACATTGAAAACCGAGATGTTGCCAAGTCTGTTCTGAAGGAGAGAGGACTGAAGAAAATTCGATTAGGCATTGAAGGATACCCAACCTACAAAGAAAAAGTGAAGAAGCGTCCTGGCGGCCGTCCCGAGGTCATCTACAACTACGTCCAGCGGCCCTTTATCCGCATGTCCTGGGAGAAAGAGGAGGGCAAAAGCAGACACGTGGACTTTCAGTGTGTGAAGAGCAAGTCAATCACTAACCTGGCTGCAGCGGCGGCAGACATTCCTCAGGACCAGCTGGTGGTGATGCATCCTGGGCCACAGGTGGACGAACTCGACATCCTCCCAAACCACCCACAGCCCAGCCAACATTATGAGCCCGATCCTGACGCCTCGTCCCCAGCCAtctgaccctcacacacacacacacaaacacacactccactGGTCCCGCTGCCAAGACCGCATTGCCTTTCTAGTCTCTCCCGCCTTACACGAGTCTTCAAGACAAGCACTGCGGCAGCACACCTCCTCCAGACACTCTTTCCTGGACACAACTCAGCCAAAGCAGGCAGAGGAGATCATTGGACAAGGCAAAACACAACACAGTGAGTATAGAATGACATGAAACGCAGAGGCTGCTGACTCATCAATAAACACAGCAACCATCCATAAGGTCAGTCACAAATGTCAGGTGTATCAGCTGCCTTAATAAAGCTATCAACTTACATGTCACGACTCAATTGTGAGACTCACATAATGGCCAAAATAACCCTGCAACATGTAAACTATGAGCTTTTAACTTGCATTTAGGAGAGGGGTTGTTATGATATGAGTATGATGATATGAAAAGTAATTCTGATTTAAAGTCATAATGCAAGTTTAAACTAGAGCTTTctaacttaaaaacaaacaattgtgaTTTATAAAAGTCCCAattatcttttttatatatatatatatatatattatccgtGGACACCTGCTTTCATAGATTGTACTATATTTGTGGTGCTGTTTTGCTACTGCTGTTTCACTTTGCAATAAAAAGAAAAGGAGCACAATCCACTGAACAACCCTGCACATGTCCTGTGATGAAGCAGAATGCATTCGTTGTAGGTCTAGTGTGGTGGAGACGGTCTCACTGTGATGCTTGGCCTCTGAACGAGTACTGAAGTGATGTCACGTTTTTATTGTACcgtactttttattttactgtcatttgtagctgcagtgcagcgagagagagagagacgttcCTCTACTGCACCGctgacaaatgttattttaataaagcattgtTGGATCAGTTAGACTCCTTTCTGATCATAGAAATCAGTGTTTATAGGCCACACATCTATCAAGAGTTTATACAGTACTAtgaaaatactttaataaatactttgtgtgtatttttgtcaCAATTTA
>TCONS_00047663
ATATATGTCAACAATGAACACCATCGTGAATGATGAAGATCAAGCTCAAGTAGATTCATGGAACGGCTAATGTTTGTTAAATAGCTTCAGCGTACACTTCGTGGAGGACGTTCAGCGTTAGGAAGAGACAGGATATGAGATCTGAAAGCCTTTCAGTCCAGTATTATCAACTCTTTTGAGATGGCAGCACACCCTGTCTCTTATGACAGCCATTCGAGCGATTCCGAAAATTGGGATCAAAGTACAACTTGTCGGTCTAGAAGAGTCTGCAGACGCCTCAGtctgtgtgtgtgttggcagtGGTCAGCCGCGTGGAGCTCATCTGGAAGGTGATCTACTCAACATGAGTCTGCATGGAGCCAGTGGAGGAGCAGGAGCCCTGGAGCAGCACAGAGAGAGGAGGAGGTCTGGAGACCGCTCCAGAGACTCTTCACATGACAGAGGAGAGGGTCAGCTCACTCCTTGCATCAGGAACGTCACCTCACCCATACGCCAGACCCTCGGCGAGCGTGAGCGGGACTCAGGCTGCTCATCGCGCTCCACCAGTCCCAGGCCTCAGAAAGCATGCTCCTCCAGTCTCTTCTACACCGACTCCCATGGAAAAACCCACAGCTCCGACATGATCTATGTCTGCGAAAACCTCAAAGAGGGCCCTCGCAGTTTGAGGACTGCTGAAAGAGTCACTCTGATTGTAGACAACACTCGTTTCGTGGTCGATCCATCCATCTTCACCGCTCAACCCAACACCATGCTTGGCAG
>TCONS_00047665
TCATGCTCGCGCGTGCGGCTCCGTCAGGTTACTATGCCACCGTCCTCCCGTCGACGCTACCTGAGGGCGTCCTTTCTTCCCGGACTGCGGCGTTTGGATGCTGTGTTCTTGGCCAATAAGTTCCACTGCATTATGCTGAAGTTTGAAAGTAATGCCCGAGGATGTTAAGTCGCCCGGAAAGCCGTGGTTGGGCGAAGGAGCGCGCGTCCTTTGTGCGTTCATTCATCAGCTGCTTCCCTGCTGCTTTGTTTTGAAGAGAGGCGGtGGTCAGCCGCGTGGAGCTCATCTGGAAGGTGATCTACTCAACATGAGTCTGCATGGAGCCAGTGGAGGAGCAGGAGCCCTGGAGCAGCACAGAGAGAGGAGGAGGTCTGGAGACCGCTCCAGAGACTCTTCACATGACAGAGGAGAGGGTCAGCTCACTCCTTGCATCAGGAACGTCACCTCACCCATACGCCAGACCCTCGGCGAGCGTGAGCGGGACTCAGGCTGCTCATCGCGCTCCACCAGTCCCAGGCCTCAGAAAGCATGCTCCTCCAGTCTCTTCTACACCGACTCCCATGGAAAAACCCACAGCTCCGACATGATCTATGTCTGCGAAAACCTCAAAGAGGGCCCTCGCAGTTTGAGGACTGCTGAAAGAGTCACTCTGATTGTAGACAACACTCGTTTCGTGGTCGATCCATCCATCTTCACCGCTCAACCCAACACCATGCTTGGCAGGATGTTCGGATCTGGACGGGAACACAACTTCACGCGTCCTAATGAAAAGGGAGAGTATGAGGTTGCAGAGGGAATCAGCTCCACTGTGTTCAGAGCCATTTTG
>TCONS_00047666
TCTTGTGGGAAAAATGTGGCAAGTTTTATTTTTAGAGAGGCTGCTGGTCTCTAATCTAATATTCTGTCGTTTGGAAATGAGTTGGTTTGGACGCGCGTGAGAAACGCGTTGTCTCGCTTTTTAACGGTGTCAGCAGGACGCTGAATTATTAATGCTACTTTCTCTtGGTCAGCCGCGTGGAGCTCATCTGGAAGGTGATCTACTCAACATGAGTCTGCATGGAGCCAGTGGAGGAGCAGGAGCCCTGGAGCAGCACAGAGAGAGGAGGAGGTCTGGAGACCGCTCCAGAGACTCTTCACATGACAGAGGAGAGGGTCAGCTCACTCCTTGCATCAGGAACGTCACCTCACCCATACGCCAGACCCTCGGCGAGCGTGAGCGGGACTCAGGCTGCTCATCGCGCTCCACCAGTCCCAGGCCTCAGAAAGCATGCTCCTCCAGTCTCTTCTACACCGACTCCCATGGAAAAACCCACAGCTCCGACATGATCTATGTCTGCGAAAACCTCAAAGAGGGCCCTCGCAGTTTGAGGACTGCTGAAAGAGTCACTCTGATTGTAGACAACACTCGTTTCGTGGTCGATCCATCCATCTTCACCGCTCAACCCAACACCATGCTTGGCAGGATGTTCGGATCTGGACGGGAACACAACTTCACGCGTCCTAATGAAAAGGGAGAGTATGAGGTTGCAGAGGGAATCAGCTCCACTGTGTTCAGAGCCATTT

Function

symbol description
btbd10a Predicted to be involved in positive regulation of phosphorylation. Predicted to be active in cytoplasm. Orthologous to human BTBD10 (BTB domain containing 10).

GO:

id name namespace
GO:0042327 positive regulation of phosphorylation biological_process
GO:0005737 cytoplasm cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-070410-41 Predicted to be involved in positive regulation of phosphorylation. Predicted to be active in cytoplasm. Orthologous to human BTBD10 (BTB domain containing 10).

Ensembl:

ensembl_id ENSDARG00000062674

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047662 False 3131 mRNA 0.45 9 17862338 17892711
TCONS_00047664 False 2634 lncRNA 0.47 10 17862338 17892830
TCONS_00047663 False 759 nonsense_mediated_decay 0.52 4 17862368 17878632
TCONS_00047665 False 826 mRNA 0.56 4 17870799 17880528
TCONS_00047666 True 725 mRNA 0.52 4 17871089 17880526

Neighbor

gene id symbol gene type direction distance location
XLOC_024012 pth1a coding upstream 642 17860798 ~ 17861696 (+)
XLOC_024011 PYURF coding upstream 12764 17847054 ~ 17849574 (+)
XLOC_024010 galnt18a coding upstream 36824 17689565 ~ 17825514 (+)
XLOC_024009 vac14 coding upstream 249313 17589906 ~ 17613025 (+)
XLOC_024008 NA coding upstream 326422 17528781 ~ 17535916 (+)
XLOC_024014 borcs5 coding downstream 27531 17920361 ~ 17925146 (+)
XLOC_024015 C25H12orf29 coding downstream 32594 17925424 ~ 17934675 (+)
XLOC_024016 tmtc3 coding downstream 109538 18002368 ~ 18055064 (+)
XLOC_024017 BX901919.1 coding downstream 204917 18097747 ~ 18097861 (+)
XLOC_024018 NA coding downstream 214562 18107392 ~ 18250076 (+)
XLOC_023973 CR762411.1 misc upstream 2644229 15217824 ~ 15218109 (+)
XLOC_024007 NA non-coding upstream 351919 17502996 ~ 17510419 (+)
XLOC_024002 NA non-coding upstream 901837 16958172 ~ 16960501 (+)
XLOC_023998 NA non-coding upstream 1025389 16829884 ~ 16836949 (+)
XLOC_023997 BX004976.1 non-coding upstream 1090430 16771791 ~ 16771908 (+)
XLOC_024019 NA non-coding downstream 416485 18309315 ~ 18314927 (+)
XLOC_024020 NA non-coding downstream 466198 18359028 ~ 18361288 (+)
XLOC_024027 NA non-coding downstream 851191 18744021 ~ 18745029 (+)

Expression


Co-expression Network