G465451


Basic Information

Item Value
gene id G465451
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 2647261 ~ 2649273 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU528614
GACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTTCCTGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTTCCTGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTTCCTGACTGTCCGTGGTCTGTTCCTGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTTCCTGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGT
>TU528616
GACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTTCCTGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTTCCTGACTGTCCGTGGTCTGTAGCAGACTGTTCGTGGTCTGTTCCTGACTGTCCGTGGTCTGTAGCAGACTGTCAGTGGTCTGTTCCTGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTAGCAGACTGTCAGTGGTCTGTTCCTGACTGTCCGTGGTCTGTTCCTGACTGTCCGTGGTCTGTTCCTGACTGTTCGCTGTCTGTTCCTGACTGTCCGTGGTCTGTTCCTGACTGTTCGCTGTCTGTTCCTGACTGTTCGCTGTCTGTTCCTGACTGTTCGCTGTCTGTTCCTGACTGTTCGTGGTCTGTTCCTGACTGTTCGCTGTCTGTTCCTGACTGTTCGTGGTCTGTTGCTGACTGTTCGCTGTCTGTTCCTGACTGTTCGCTGTCTGTTCCTGACTGTTCGCTGTCTGTTCCTGactgttctctgtctgttcctGACTGTTCGCTGTCTGTTCCTGactgttctctgtctgttcctGACTGTTCGCTGTCTGTTCCTGACTGTTCGTGGTCTGTTCCTGACTGTTCGCTGTCTGTACTGTAAATTGCAGAGCAAAGCAGTCAGTACCTGACTGTTCGCTGTCTGTACTGTAAGTTGAGGAGTAAAGCAGTCAGTACCTGACTGTTCGCTGTCTGTACTGTAAATTGAGGAGTAAAGCAGTCAGTACCTGACTGTTCGCTGTCTGTACTGTAAATTGAGGAGTAAAGCAGTCAGTACCTGACTGTCCGTGGTCTGTAGCAGACTGTCCGTGGTCTGTTCCTGACTGTTCGCTGTCTGTACTGTAAATTGCAGAGCAAAGCAGTCAGTACCAGACTGTCCGTGGTCTGTACTGTAAATTGAGGAGTAAAGCAGTCAGT

Function

NR:

description
PREDICTED: keratin-associated protein 5-4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU528614 False 349 lncRNA 0.57 2 2647261 2648218
TU528616 True 1010 lncRNA 0.52 6 2647261 2649273

Neighbor

gene id symbol gene type direction distance location
LOC110525158 LOC106570936 coding upstream 158022 2466474 ~ 2489239 (+)
mtmr12 mtmr12 coding upstream 200791 2410231 ~ 2446470 (+)
zfr zfr coding upstream 238000 2342330 ~ 2451362 (+)
LOC110525063 LOC106570939 coding upstream 447367 2149240 ~ 2199894 (+)
LOC110525062 LOC106570947 coding upstream 542120 2002088 ~ 2105141 (+)
LOC110516346 NA coding downstream 74492 2723765 ~ 2724931 (+)
LOC110525071 LOC106585963 coding downstream 94691 2743964 ~ 2866482 (+)
isl1 isl1 coding downstream 435408 3084681 ~ 3092690 (+)
fst fst coding downstream 814396 3463669 ~ 3491741 (+)
LOC118964791 NA coding downstream 891093 3540366 ~ 3542885 (+)
G465394 NA non-coding upstream 126450 2518810 ~ 2520811 (+)
G465378 NA non-coding upstream 166752 2475968 ~ 2480509 (+)
G465353 NA non-coding upstream 172198 2394482 ~ 2475063 (+)
G465454 NA non-coding downstream 7468 2656741 ~ 2657202 (+)
G465458 NA non-coding downstream 19470 2668743 ~ 2669734 (+)
G465461 NA non-coding downstream 27564 2676837 ~ 2677087 (+)
G465477 NA non-coding downstream 57839 2707112 ~ 2709859 (+)
G465355 NA other upstream 241171 2405119 ~ 2406090 (+)
G465203 NA other upstream 583194 2062328 ~ 2064067 (+)
G464705 NA other upstream 1418162 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 2188255 442716 ~ 549899 (+)
G465578 NA other downstream 329569 2978842 ~ 2982425 (+)
G466813 NA other downstream 1123591 3772864 ~ 3773340 (+)
G468732 NA other downstream 3459106 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 3545499 6194772 ~ 6199155 (+)

Expression


Co-expression Network