Gene
RNA
| Item | Value |
|---|---|
| gene id | G465458 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 2668743 ~ 2669734 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU528624 | False | 247 | lncRNA | 0.44 | 2 | 2668743 | 2669497 |
| TU528625 | False | 284 | lncRNA | 0.42 | 2 | 2668743 | 2669734 |
| TU528626 | True | 225 | lncRNA | 0.44 | 2 | 2668743 | 2669225 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525158 | LOC106570936 | coding | upstream | 179504 | 2466474 ~ 2489239 (+) |
| mtmr12 | mtmr12 | coding | upstream | 222273 | 2410231 ~ 2446470 (+) |
| zfr | zfr | coding | upstream | 259482 | 2342330 ~ 2451362 (+) |
| LOC110525063 | LOC106570939 | coding | upstream | 468849 | 2149240 ~ 2199894 (+) |
| LOC110525062 | LOC106570947 | coding | upstream | 563602 | 2002088 ~ 2105141 (+) |
| LOC110516346 | NA | coding | downstream | 54031 | 2723765 ~ 2724931 (+) |
| LOC110525071 | LOC106585963 | coding | downstream | 74230 | 2743964 ~ 2866482 (+) |
| isl1 | isl1 | coding | downstream | 414947 | 3084681 ~ 3092690 (+) |
| fst | fst | coding | downstream | 793935 | 3463669 ~ 3491741 (+) |
| LOC118964791 | NA | coding | downstream | 870632 | 3540366 ~ 3542885 (+) |
| G465454 | NA | non-coding | upstream | 11541 | 2656741 ~ 2657202 (+) |
| G465451 | NA | non-coding | upstream | 19470 | 2647261 ~ 2649273 (+) |
| G465394 | NA | non-coding | upstream | 147932 | 2518810 ~ 2520811 (+) |
| G465378 | NA | non-coding | upstream | 188234 | 2475968 ~ 2480509 (+) |
| G465353 | NA | non-coding | upstream | 193680 | 2394482 ~ 2475063 (+) |
| G465461 | NA | non-coding | downstream | 7103 | 2676837 ~ 2677087 (+) |
| G465477 | NA | non-coding | downstream | 37378 | 2707112 ~ 2709859 (+) |
| G465499 | NA | non-coding | downstream | 81457 | 2751191 ~ 2751535 (+) |
| G465526 | NA | non-coding | downstream | 136164 | 2805898 ~ 2806263 (+) |
| G465355 | NA | other | upstream | 262653 | 2405119 ~ 2406090 (+) |
| G465203 | NA | other | upstream | 604676 | 2062328 ~ 2064067 (+) |
| G464705 | NA | other | upstream | 1439644 | 1228705 ~ 1229099 (+) |
| LOC110525138 | rufy3 | other | upstream | 2209737 | 442716 ~ 549899 (+) |
| G465578 | NA | other | downstream | 309108 | 2978842 ~ 2982425 (+) |
| G466813 | NA | other | downstream | 1103130 | 3772864 ~ 3773340 (+) |
| G468732 | NA | other | downstream | 3438645 | 6108379 ~ 6156681 (+) |
| G468643 | LOC106607869 | other | downstream | 3525038 | 6194772 ~ 6199155 (+) |
