Gene
RNA
| Item | Value |
|---|---|
| gene id | G465477 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 2707112 ~ 2709859 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU528650 | False | 210 | lncRNA | 0.47 | 2 | 2707112 | 2709859 |
| TU528651 | True | 338 | lncRNA | 0.47 | 2 | 2708489 | 2709859 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525158 | LOC106570936 | coding | upstream | 217873 | 2466474 ~ 2489239 (+) |
| mtmr12 | mtmr12 | coding | upstream | 260642 | 2410231 ~ 2446470 (+) |
| zfr | zfr | coding | upstream | 297851 | 2342330 ~ 2451362 (+) |
| LOC110525063 | LOC106570939 | coding | upstream | 507218 | 2149240 ~ 2199894 (+) |
| LOC110525062 | LOC106570947 | coding | upstream | 601971 | 2002088 ~ 2105141 (+) |
| LOC110516346 | NA | coding | downstream | 13906 | 2723765 ~ 2724931 (+) |
| LOC110525071 | LOC106585963 | coding | downstream | 34105 | 2743964 ~ 2866482 (+) |
| isl1 | isl1 | coding | downstream | 374822 | 3084681 ~ 3092690 (+) |
| fst | fst | coding | downstream | 753810 | 3463669 ~ 3491741 (+) |
| LOC118964791 | NA | coding | downstream | 830507 | 3540366 ~ 3542885 (+) |
| G465461 | NA | non-coding | upstream | 30025 | 2676837 ~ 2677087 (+) |
| G465458 | NA | non-coding | upstream | 37378 | 2668743 ~ 2669734 (+) |
| G465454 | NA | non-coding | upstream | 49910 | 2656741 ~ 2657202 (+) |
| G465451 | NA | non-coding | upstream | 57839 | 2647261 ~ 2649273 (+) |
| G465394 | NA | non-coding | upstream | 186301 | 2518810 ~ 2520811 (+) |
| G465499 | NA | non-coding | downstream | 41332 | 2751191 ~ 2751535 (+) |
| G465526 | NA | non-coding | downstream | 96039 | 2805898 ~ 2806263 (+) |
| G465527 | NA | non-coding | downstream | 97701 | 2807560 ~ 2809159 (+) |
| G465535 | NA | non-coding | downstream | 115658 | 2825517 ~ 2828010 (+) |
| G465355 | NA | other | upstream | 301022 | 2405119 ~ 2406090 (+) |
| G465203 | NA | other | upstream | 643045 | 2062328 ~ 2064067 (+) |
| G464705 | NA | other | upstream | 1478013 | 1228705 ~ 1229099 (+) |
| LOC110525138 | rufy3 | other | upstream | 2248106 | 442716 ~ 549899 (+) |
| G465578 | NA | other | downstream | 268983 | 2978842 ~ 2982425 (+) |
| G466813 | NA | other | downstream | 1063005 | 3772864 ~ 3773340 (+) |
| G468732 | NA | other | downstream | 3398520 | 6108379 ~ 6156681 (+) |
| G468643 | LOC106607869 | other | downstream | 3484913 | 6194772 ~ 6199155 (+) |
