G466239


Basic Information

Item Value
gene id G466239
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 3012071 ~ 3012366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU529636
gatgatacagtcttatactcagctggcccctccccggatgttgtgttaaatgctctataACAAATCTTTCTTAGTGTCCatcaagctttctctgcccttaaccttgtttgaacacctccaaaacaaaggtcatgtggtttggtaagaagaatgcccctctccccaccggtgtgattactacctctgagggtttagagcttgaggtagtcacctcatacaaatacttgggagtatggctagacggtacactgtccttctctcagcacttATCAAAGaagcaggctaaagttaaatct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU529636 True 296 lncRNA 0.44 1 3012071 3012366

Neighbor

gene id symbol gene type direction distance location
LOC110525071 LOC106585963 coding upstream 145589 2743964 ~ 2866482 (+)
LOC110516346 NA coding upstream 287140 2723765 ~ 2724931 (+)
pdzd2 pdzd2 coding upstream 297771 2553211 ~ 2714300 (+)
LOC110525158 LOC106570936 coding upstream 522832 2466474 ~ 2489239 (+)
mtmr12 mtmr12 coding upstream 565601 2410231 ~ 2446470 (+)
isl1 isl1 coding downstream 72315 3084681 ~ 3092690 (+)
fst fst coding downstream 451303 3463669 ~ 3491741 (+)
LOC118964791 NA coding downstream 528000 3540366 ~ 3542885 (+)
hspb3 hspb3 coding downstream 805672 3818038 ~ 3823330 (+)
LOC110513046 snx18 coding downstream 814804 3827170 ~ 3866575 (+)
G466212 NA non-coding upstream 22190 2989077 ~ 2989881 (+)
G465539 NA non-coding upstream 27681 2842347 ~ 2984390 (+)
G465580 NA non-coding upstream 31796 2979835 ~ 2980275 (+)
G465541 NA non-coding upstream 161871 2849708 ~ 2850200 (+)
G465535 NA non-coding upstream 184061 2825517 ~ 2828010 (+)
G466258 NA non-coding downstream 34529 3046895 ~ 3047113 (+)
G466259 NA non-coding downstream 34926 3047292 ~ 3047939 (+)
G466302 NA non-coding downstream 104534 3116900 ~ 3117150 (+)
G466357 NA non-coding downstream 173977 3186343 ~ 3188741 (+)
G466358 NA non-coding downstream 176543 3188909 ~ 3189108 (+)
G465578 NA other upstream 29646 2978842 ~ 2982425 (+)
zfr zfr other upstream 602813 2342330 ~ 2451362 (+)
G465355 NA other upstream 605981 2405119 ~ 2406090 (+)
G465203 NA other upstream 948004 2062328 ~ 2064067 (+)
G466813 NA other downstream 760498 3772864 ~ 3773340 (+)
G468732 NA other downstream 3096013 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 3182406 6194772 ~ 6199155 (+)
G468755 NA other downstream 3197833 6210199 ~ 6244501 (+)
G468768 NA other downstream 3242110 6254476 ~ 6371873 (+)

Expression


Co-expression Network