G466259


Basic Information

Item Value
gene id G466259
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 3047292 ~ 3047939 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU529663
gaatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacatctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagtaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttctattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatacctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctctcacc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU529663 True 648 lncRNA 0.43 1 3047292 3047939

Neighbor

gene id symbol gene type direction distance location
LOC110525071 LOC106585963 coding upstream 180810 2743964 ~ 2866482 (+)
LOC110516346 NA coding upstream 322361 2723765 ~ 2724931 (+)
pdzd2 pdzd2 coding upstream 332992 2553211 ~ 2714300 (+)
LOC110525158 LOC106570936 coding upstream 558053 2466474 ~ 2489239 (+)
mtmr12 mtmr12 coding upstream 600822 2410231 ~ 2446470 (+)
isl1 isl1 coding downstream 36742 3084681 ~ 3092690 (+)
fst fst coding downstream 415730 3463669 ~ 3491741 (+)
LOC118964791 NA coding downstream 492427 3540366 ~ 3542885 (+)
hspb3 hspb3 coding downstream 770099 3818038 ~ 3823330 (+)
LOC110513046 snx18 coding downstream 779231 3827170 ~ 3866575 (+)
G466258 NA non-coding upstream 179 3046895 ~ 3047113 (+)
G466239 NA non-coding upstream 34926 3012071 ~ 3012366 (+)
G466212 NA non-coding upstream 57411 2989077 ~ 2989881 (+)
G465539 NA non-coding upstream 62902 2842347 ~ 2984390 (+)
G466302 NA non-coding downstream 68961 3116900 ~ 3117150 (+)
G466357 NA non-coding downstream 138404 3186343 ~ 3188741 (+)
G466358 NA non-coding downstream 140970 3188909 ~ 3189108 (+)
G466375 NA non-coding downstream 207135 3255074 ~ 3256675 (+)
G466377 NA non-coding downstream 208871 3256810 ~ 3367123 (+)
G465578 NA other upstream 64867 2978842 ~ 2982425 (+)
zfr zfr other upstream 638034 2342330 ~ 2451362 (+)
G465355 NA other upstream 641202 2405119 ~ 2406090 (+)
G465203 NA other upstream 983225 2062328 ~ 2064067 (+)
G466813 NA other downstream 724925 3772864 ~ 3773340 (+)
G468732 NA other downstream 3060440 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 3146833 6194772 ~ 6199155 (+)
G468755 NA other downstream 3162260 6210199 ~ 6244501 (+)
G468768 NA other downstream 3206537 6254476 ~ 6371873 (+)

Expression


Co-expression Network