G466539


Basic Information

Item Value
gene id G466539
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 3412854 ~ 3413058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU530021
ggtttggatagaaaacactctgatgtttctaaaactgtttgaatgatgtctgtgagtataacagaactcatatggcaggcaaaaacctgagaaaaatccaaccaggaagtgggaaatctgaggtttgtagtttttcaagtgaaTGCCTATCCAATAtccagtgtaaatggggtcaaattgcacttcctaaggcttccactagatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU530021 True 205 lncRNA 0.39 1 3412854 3413058

Neighbor

gene id symbol gene type direction distance location
isl1 isl1 coding upstream 320164 3084681 ~ 3092690 (+)
LOC110525071 LOC106585963 coding upstream 546372 2743964 ~ 2866482 (+)
LOC110516346 NA coding upstream 687923 2723765 ~ 2724931 (+)
pdzd2 pdzd2 coding upstream 698554 2553211 ~ 2714300 (+)
LOC110525158 LOC106570936 coding upstream 923615 2466474 ~ 2489239 (+)
fst fst coding downstream 50611 3463669 ~ 3491741 (+)
LOC118964791 NA coding downstream 127308 3540366 ~ 3542885 (+)
hspb3 hspb3 coding downstream 404980 3818038 ~ 3823330 (+)
LOC110513046 snx18 coding downstream 414112 3827170 ~ 3866575 (+)
LOC110525164 LOC106585954 coding downstream 583075 3996133 ~ 4032894 (+)
G466499 NA non-coding upstream 41476 3371123 ~ 3371378 (+)
G466377 NA non-coding upstream 45731 3256810 ~ 3367123 (+)
G466415 NA non-coding upstream 64031 3312588 ~ 3348823 (+)
G466420 NA non-coding upstream 88796 3323641 ~ 3324058 (+)
G466376 NA non-coding upstream 147450 3261023 ~ 3265404 (+)
G466555 NA non-coding downstream 21396 3434454 ~ 3436591 (+)
G466568 NA non-coding downstream 37679 3450737 ~ 3450951 (+)
G466579 NA non-coding downstream 54541 3467599 ~ 3467922 (+)
G466585 NA non-coding downstream 74632 3487690 ~ 3488668 (+)
G465578 NA other upstream 430429 2978842 ~ 2982425 (+)
zfr zfr other upstream 1003596 2342330 ~ 2451362 (+)
G465355 NA other upstream 1006764 2405119 ~ 2406090 (+)
G465203 NA other upstream 1348787 2062328 ~ 2064067 (+)
G466813 NA other downstream 359806 3772864 ~ 3773340 (+)
G468732 NA other downstream 2695321 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 2781714 6194772 ~ 6199155 (+)
G468755 NA other downstream 2797141 6210199 ~ 6244501 (+)
G468768 NA other downstream 2841418 6254476 ~ 6371873 (+)

Expression


Co-expression Network