Gene
RNA
| Item | Value |
|---|---|
| gene id | G467274 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 4527615 ~ 4532854 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU530893 | False | 903 | lncRNA | 0.33 | 3 | 4527615 | 4531917 |
| TU530895 | False | 2146 | lncRNA | 0.33 | 6 | 4527615 | 4532854 |
| TU530899 | False | 372 | lncRNA | 0.33 | 3 | 4527615 | 4532854 |
| TU530900 | False | 1246 | lncRNA | 0.33 | 5 | 4527615 | 4532854 |
| TU530907 | False | 1042 | lncRNA | 0.33 | 5 | 4527615 | 4532854 |
| TU530889 | False | 1109 | lncRNA | 0.34 | 3 | 4528059 | 4531917 |
| TU530898 | False | 946 | lncRNA | 0.34 | 3 | 4528059 | 4532854 |
| TU530901 | False | 909 | lncRNA | 0.34 | 4 | 4528059 | 4531917 |
| TU530911 | True | 1002 | lncRNA | 0.34 | 3 | 4528059 | 4532854 |
4,523,000
4,524,000
4,525,000
4,526,000
4,527,000
4,528,000
4,529,000
4,530,000
4,531,000
4,532,000
4,533,000
4,534,000
4,535,000
4,536,000
4,537,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511702 | LOC106585945 | coding | upstream | 201933 | 4143188 ~ 4325682 (+) |
| LOC110525166 | LOC106585946 | coding | upstream | 250110 | 4258161 ~ 4277505 (+) |
| LOC110525165 | LOC105014571 | coding | upstream | 405211 | 4049477 ~ 4122404 (+) |
| LOC110525164 | LOC106585954 | coding | upstream | 494721 | 3996133 ~ 4032894 (+) |
| LOC110513046 | snx18 | coding | upstream | 661040 | 3827170 ~ 3866575 (+) |
| LOC118964808 | NA | coding | downstream | 59950 | 4592804 ~ 4594190 (+) |
| LOC110525169 | LOC106585939 | coding | downstream | 111100 | 4643954 ~ 4650871 (+) |
| LOC110525174 | gpx8 | coding | downstream | 257984 | 4790838 ~ 4792423 (+) |
| bmp2k | LOC106585926 | coding | downstream | 310021 | 4842875 ~ 4935449 (+) |
| LOC118964809 | NA | coding | downstream | 382012 | 4914866 ~ 4918091 (+) |
| G467261 | NA | non-coding | upstream | 30151 | 4496648 ~ 4497464 (+) |
| G467206 | NA | non-coding | upstream | 105438 | 4421510 ~ 4422177 (+) |
| G467181 | NA | non-coding | upstream | 157774 | 4369215 ~ 4369841 (+) |
| G467155 | NA | non-coding | upstream | 205133 | 4321745 ~ 4322482 (+) |
| G467153 | NA | non-coding | upstream | 207898 | 4319316 ~ 4319717 (+) |
| G467285 | NA | non-coding | downstream | 17769 | 4550623 ~ 4551753 (+) |
| G467221 | NA | non-coding | downstream | 55054 | 4587908 ~ 4597359 (+) |
| G467293 | LOC106570909 | non-coding | downstream | 69718 | 4602572 ~ 4603398 (+) |
| G467294 | LOC105014525 | non-coding | downstream | 77010 | 4609864 ~ 4610874 (+) |
| G467643 | NA | non-coding | downstream | 98708 | 4631562 ~ 4632132 (+) |
| G466813 | NA | other | upstream | 754275 | 3772864 ~ 3773340 (+) |
| G465578 | NA | other | upstream | 1545190 | 2978842 ~ 2982425 (+) |
| LOC110525071 | LOC106585963 | other | upstream | 1693505 | 2743964 ~ 2866482 (+) |
| zfr | zfr | other | upstream | 2118357 | 2342330 ~ 2451362 (+) |
| G468732 | NA | other | downstream | 1575525 | 6108379 ~ 6156681 (+) |
| G468643 | LOC106607869 | other | downstream | 1661918 | 6194772 ~ 6199155 (+) |
| G468755 | NA | other | downstream | 1677345 | 6210199 ~ 6244501 (+) |
| G468768 | NA | other | downstream | 1721622 | 6254476 ~ 6371873 (+) |
| G468791 | NA | other | downstream | 1844785 | 6350096 ~ 6379704 (+) |
