XLOC_024042 (glsl)


Basic Information

Item Value
gene id XLOC_024042
gene name glsl
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 19485198 ~ 19521245 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047705
CgggcacaaccatttcttctctggccaaactGGCCAAAAGGATCAATGTGTACTGGTATTGTTTAgatcacaaaacaaacacacacacacacacacacacacacacacacacacacacacaaataaaaacctGAACAGCAAAgacataacaaatatatatacattttatttggcaaaaaaaaaaaaatcttaatatggTTGACTTGATGATAATTTTCTTGAATTAAGGATATCCCGGAACTAAACAATCAACCCACTTCAGCATCAAGCACTAGCCTCTGTCCTCAGTTTCTTGAGGATTTCCTCCTGGCTCACATCTGCCGTCACTCTGATCACCTTTTCTCTCGATTTGGACCCCTGTTGTGCAATTGAAACCacattaatgattaaaaaaagcatataatTAAGTGTAGCGGCCTGAAAGCACTTAAATAACGGCGTTTATAGGAGCTGACCTTGTCTAATGATACTTCGCTTTTCTTCAGCTGCAGGACTTTGGATAAAAAGCGCAGGAGTTCAGCGTTTGCCTCTCCATCTGTCGGCGGCGCAGCAATGGCGACCCCCACCGCCTCCTCAGACACATCTGGCAAAACAAGAGGAAAAACTGGGGTTACTGTGAACCAACTCCCAACAGATAACGAAACACAGATCCCTCCTCCAAGATGCAGTTAAGTTCCTCCTATTTTCATCCAGCCACAAACTGGCTGTTCACACAGAGACTGAGCTCAAACACAGCTGCCAAAGAGACCCATCTTCATCTCCACATGCAGCACAAACACACCATCTGGATTCCCTAAAACTCCCAGTCGACAGTGAAGAACGGCTTTATCATGGAGAACAGCTTAAACCAAGAAGCAGAGGAAAATCCCTACCTGTGTTTTCAGAGAACACCATCTCTCAGACGTAAATGGAGAAAGCGCTATGGAGGCCTGGATGGAAACAAACTGCTGGAGCCGAATAAAGAGGACGACACAAGAGAGATTGGAGAGCTGACGGAGCCACTGAAGTTGAAGGAAACTAAATCCGCAGGGAACATTCCTCAACATGTGCCAAGAAATACCTTTCCACAGCAGAGGCCAGTCAATTACGTCTCACCAGGCTCTACAGGCATGCCATCTTTTATAAGCAATGGGGGCACAAAACGGACTGTTCCAGAGCATGAAAAACTTCATGCCGGCCAAGCGTGGCAACACTTGGGCCGACAAGACACCCATCAAGgacattttaagaaaaaagtGGCTGCTGATGTGCTGTTTGATAGTTTCGCCTCTGGAGGAAGAGTTAACTGCAATCAGTTTTTTGAGGCCCTGTGGAGCTCAGGGATTATCCGAACAGATCCACGGATTAAAGACTGCTACAGCCTGATGAGAAAACTTCAGGAAGCGGATGGAACGGTTGACAGGAGCATGTTTCACAGGTGCGTGACAGGCTTTGTGTCGTTCATCCTGAAGGCACTGCAGGGGCGATTTGTCATTCCTGATTTCTCGACTTTTGCAGAGGAAACACAAAAGCTGTTTATTAAATGCAAACAACTGTCCTCTGTGAAGGAGAAAGAAGATGTAGGAGACAGTGGCACAAAATGGGGCATTTCGGTGTGTACTGTAGATGGGCAAAGACTTTCTTTAGGAGACTGGGCTGAACCTTGCACTCTGGGAGAAATTTCCTGGCCTCTTATATACGGCCTGGCAGTGGATCAGCAGGGCTCAGACTACGTGCACAGATATGTGGGAATGGAGGAATATTCCAAATACGAGTCTCTGTTCACCCTGACCAAACAAGGTGTTCCTCATAGTCCGCTGGTTGAGACAGGAGCAATTATCTGTACTTCTTTATTACAGCTAGCAACAAGACCAGTCACTGATGAGGAGGAAAAGTATGAGTCTGTTTTGAATATAATCCGAAGACTGTGCAACAAGGAGCACGTAAACCTCAACTGCACCAGTTATCAAGACCTGCGAAAAGACATCGTCCGTCTCCACGCTCTTTCATTTTACTTGCAGGAAAAGAAATGCTTTCCAGAAGGTGTGGGGATCAATGCAACGCTGGATTTACTGTTGCAGtGTTTATCAACAGAAGTCACATGCGAGTCTGGTGCAGCTTTGGCAGCAACGCTTGCTAACGGAGGCCTGTGCCCGCTATCTGGTGACCAAGTGATGTCACCCCATGCCGTCCGCAGTACCCTGACCATGATGCAGGTGGCTGGCATGAATGATTATTCCAGAGCGTTTCATTTCAGGGTGTCTGTCCCTGCCAAGTCCAGTCAGTCTGGTGTTGTGCTGATGGTGGTTCCTGCAGTTCTGGGACTCATGTGTTGGTCACCTGGACTGGATTGCAATGGAAATTCCTGGAGGAGTGTTCATTTCTGTGAGGAGCTGGTTTCAACCTTCCAGCTGCACAGTTTTGACATCAGGACTCCCTTCAGGCAGGTGCTGTGTTACAGACAGTGGAAGGTGGAGTCAGAGGGGTACCAGATCATGAATGTACTGCTGGCTGCTTATAGAGGGGACCTGGTATCTTTGCGCAGGTACCTTCTGTCAGGAGCAGATGTGAATGCAGTGGATTATGATGGACGTTCAGCACTGCATGTCGCTGCCTCTGAGGGCCGTCTGGATGTCATCAGGTTCCTGGTGGAAAATGCAGGAGCAAACTGTCATCTGAAGGACAGGTGGGGAAAGACTGCCTTACAGGAGGCCATGAGATGCAATCAAGACCCTGCCATCCAGTTTCTAAAGAAGCACACAGATAATGAAGAGAGTTTATGATGACATACTCAGAACCCACTAAgtgcatttatttaaagatttgatATTTACATTTGAGATATGAAGAATGTTATAAAAAAGCACCAGAGGCTTGGATGGAAAATATTAGTGTGTTGGCAAAAGTCCCAGAAAGCCACTCACTGCTTATTAAGAATCACAAAAAGAGATTGAAACCGTGGTTTCTCAATAAATGCTTCAACAGCATGTGTTTACTCACACAAGATTATGAATGAATCTGTACAAATGTGGTCATATTTTGCTGTTGCTGTAGGGTAAACAACAGAGTAAACAACAGTGACGGGTGTTCACTGGATAAggctatttttatatatttgtaataaatgtaatgtcCAGCAAGTTGATGCATGTTTTATCAGTGACAAAAAAAGTTgtgctgcttttttattttttagagagagcaccatttatttgaaatgtaatatttcatACTGTTAAATTACATCTCATTTAGCTTTTGATTTTTCCTGaatatgataatttttttaaacttctgACCTGTACTGCATCACATTTTCTACAAATATCAAATTATTATTGCTCTACAAATAAGCagtgtaaaatctttttttacaataataacaaGAAATGTTTTTCAAACCATTTTTGATTTTCTGTTCTgaattttgattttaatt
>TCONS_00047706
tattatattatattatattattttgttttctggtCTGTTTGTTTCTCCTGTTATTTAAAGTATACTTTTCCAGAACACAGATCCCTCCTCCAAGATGCAGTTAAGTTCCTCCTATTTTCATCCAGCCACAAACTGGCTGTTCACACAGAGACTGAGCTCAAACACAGCTGCCAAAGAGACCCATCTTCATCTCCACATGCAGCACAAACACACCATCTGGATTCCCTAAAACTCCCAGTCGACAGTGAAGAACGGCTTTATCATGGAGAACAGCTTAAACCAAGAAGCAGAGGAAAATCCCTACCTGTGTTTTCAGAGAACACCATCTCTCAGACGTAAATGGAGAAAGCGCTATGGAGGCCTGGATGGAAACAAACTGCTGGAGCCGAATAAAGAGGACGACACAAGAGAGATTGGAGAGCTGACGGAGCCACTGAAGTTGAAGGAAACTAAATCCGCAGGGAACATTCCTCAACATGTGCCAAGAAATACCTTTCCACAGCAGAGGCCAGTCAATTACGTCTCACCAGGCTCTACAGGCATGCCATCTTTTATAAGCAATGGGGGCACAAAACGGACTGTTCCAGAGCATGAAAAACTTCATGCCGGCCAAGCGTGGCAACACTTGGGCCGACAAGACACCCATCAAGgacattttaagaaaaaagtGGCTGCTGATGTGCTGTTTGATAGTTTCGCCTCTGGAGGAAGAGTTAACTGCAATCAGTTTTTTGAGGCCCTGTGGAGCTCAGGGATTATCCGAACAGATCCACGGATTAAAGACTGCTACAGCCTGATGAGAAAACTTCAGGAAGCGGATGGAACGGTTGACAGGAGCATGTTTCACAGGTGCGTGACAGGCTTTGTGTCGTTCATCCTGAAGGCACTGCAGGGGCGATTTGTCATTCCTGATTTCTCGACTTTTGCAGAGGAAACACAAAAGCTGTTTATTAAATGCAAACAACTGTCCTCTGTGAAGGAGAAAGAAGATGTAGGAGACAGTGGCACAAAATGGGGCATTTCGGTGTGTACTGTAGATGGGCAAAGACTTTCTTTAGGAGACTGGGCTGAACCTTGCACTCTGGGAGAAATTTCCTGGCCTCTTATATACGGCCTGGCAGTGGATCAGCAGGGCTCAGACTACGTGCACAGATATGTGGGAATGGAGGAATATTCCAAATACGAGTCTCTGTTCACCCTGACCAAACAAGGTGTTCCTCATAGTCCGCTGGTTGAGACAGGAGCAATTATCTGTACTTCTTTATTACAGCTAGCAACAAGACCAGTCACTGATGAGGAGGAAAAGTATGAGTCTGTTTTGAATATAATCCGAAGACTGTGCAACAAGGAGCACGTAAACCTCAACTGCACCAGTTATCAAGACCTGCGAAAAGACATCGTCCGTCTCCACGCTCTTTCATTTTACTTGCAGGAAAAGAAATGCTTTCCAGAAGGTGTGGGGATCAATGCAACGCTGGATTTACTGTTGCAGtGTTTATCAACAGAAGTCACATGCGAGTCTGGTGCAGCTTTGGCAGCAACGCTTGCTAACGGAGGCCTGTGCCCGCTATCTGGTGACCAAGTGATGTCACCCCATGCCGTCCGCAGTACCCTGACCATGATGCAGGTGGCTGGCATGAATGATTATTCCAGAGCGTTTCATTTCAGGGTGTCTGTCCCTGCCAAGTCCAGTCAGTCTGGTGTTGTGCTGATGGTGGTTCCTGCAGTTCTGGGACTCATGTGTTGGTCACCTGGACTGGATTGCAATGGAAATTCCTGGAGGAGTGTTCATTTCTGTGAGGAGCTGGTTTCAACCTTCCAGCTGCACAGTTTTGACATCAGGACTCCCTTCAGGCAGGTGCTGTGTTACAGACAGTGGAAGGTGGAGTCAGAGGGGTACCAGATCATGAATGTACTGCTGGCTGCTTATAGAGGGGACCTGGTATCTTTGCGCAGGTACCTTCTGTCAGGAGCAGATGTGAATGCAGTGGATTATGATGGACGTTCAGCACTGCATGTCGCTGCCTCTGAGGGCCGTCTGGATGTCATCAGGTTCCTGGTGGAAAATGCAGGAGCAAACTGTCATCTGAAGGACAGGTGGGGAAAGACTGCCTTACAGGAGGCCATGAGATGCAATCAAGACCCTGCCATCCAGTTTCTAAAGAAGCACACAGATAATGAAGAGAGTTTATGA
>TCONS_00047707
CCATCTTCATCTCCACATGCAGCACAAACACACCATCTGGATTCCCTAAAACTCCCAGTCGACAGTGAAGAACGGCTTTATCATGGAGAACAGCTTAAACCAAGAAGCAGAGGAAAATCCCTACCTGTGTTTTCAGAGAACACCATCTCTCAGACGTAAATGGAGAAAGCGCTATGGAGGCCTGGATGGAAACAAACTGCTGGAGCCGAATAAAGAGGACGACACAAGAGgtacaaaaataaatactgtacaattTGGTGATTTCCACTCACGGTGACCCTGGTTTTGGCATCACAGTAGCTCTGGGAACgtgtttgcattttgtttggatcATGGATCCTCTCCGCCTCACATTCCACATGTCACCACCACTGATCAGACACCAGTTCTGTAGGAAATCTGTGAGACTAGGGCTAAATGAATGGGACAGTTCGGTAGACGCTCTCATTTAACTGGGCTTGTGGTCAACATCTGGGCTGTAAAAAATGTGCAGAGGCAGTGGGTGTGTTCTGGAGAGAAGTGATGTGGCATGTGTTGGGTCTACCGTGGCTGAAAAGTACACTCCAAATTCTAAGAACTGTCATccttagctcgagtgaccatgcaaaaaaaatcaatttCTGT

Function

symbol description
glsl Predicted to enable glutaminase activity. Predicted to be involved in glutamate biosynthetic process and glutamine catabolic process. Predicted to act upstream of or within glutamine metabolic process. Is expressed in brain; pectoral fin; and swim bladder.

GO:

id name namespace
GO:0006537 glutamate biosynthetic process biological_process
GO:0006541 glutamine metabolic process biological_process
GO:0006543 glutamine catabolic process biological_process
GO:0004359 glutaminase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-131127-106 Predicted to enable glutaminase activity. Predicted to be involved in glutamate biosynthetic process and glutamine catabolic process. Predicted to act upstream of or within glutamine metabolic process. Is expressed in brain; pectoral fin; and swim bladder.

Ensembl:

ensembl_id ENSDARG00000062781

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047705 False 3418 mRNA 0.44 22 19485198 19521245
TCONS_00047706 False 2194 mRNA 0.47 21 19489370 19520589
TCONS_00047707 True 624 nonsense_mediated_decay 0.46 3 19489550 19492620

Neighbor

gene id symbol gene type direction distance location
XLOC_024041 NA coding upstream 39686 19443951 ~ 19445512 (+)
XLOC_024040 NA coding upstream 123111 19356344 ~ 19362087 (+)
XLOC_024039 ppip5k1b coding upstream 138121 19238175 ~ 19347077 (+)
XLOC_024038 hapln3 coding upstream 279323 19201231 ~ 19205875 (+)
XLOC_024036 mfge8b coding upstream 292895 19149241 ~ 19192303 (+)
XLOC_024043 sh3gl3b coding downstream 1709 19522954 ~ 19537323 (+)
XLOC_024044 nedd1 coding downstream 19774 19541019 ~ 19556986 (+)
XLOC_024045 lyrm5b coding downstream 36383 19557628 ~ 19561261 (+)
XLOC_024046 zgc:171459 coding downstream 145376 19666621 ~ 19668179 (+)
XLOC_024047 zgc:113426 coding downstream 149028 19670273 ~ 19680133 (+)
XLOC_023973 CR762411.1 misc upstream 4267089 15217824 ~ 15218109 (+)
XLOC_024031 NA non-coding upstream 560807 18920543 ~ 18924391 (+)
XLOC_024029 CR391963.2 non-coding upstream 599629 18884678 ~ 18885569 (+)
XLOC_024027 NA non-coding upstream 740169 18744021 ~ 18745029 (+)
XLOC_024053 CU041386.1 non-coding downstream 253314 19774559 ~ 19774675 (+)
XLOC_024057 NA non-coding downstream 465823 19987068 ~ 19998226 (+)
XLOC_024061 NA non-coding downstream 582020 20103265 ~ 20109429 (+)
XLOC_024066 CR846093.3 non-coding downstream 1071238 20592483 ~ 20592597 (+)
XLOC_024067 CR846093.2 non-coding downstream 1082651 20603896 ~ 20604012 (+)

Expression


Co-expression Network