G468025


Basic Information

Item Value
gene id G468025
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 5091578 ~ 5091922 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU531790
gtctctatgtttttggttggattggtttctcaatttctttcttaggtttttgcattcttcatcaaaccatttgtcaacgttcattttcttcagttttcagtttgacatttttagatttgacaGGGAAGCTGAgctgtcaaatatactgtttaggttttctactgccaagtttacaccttgaaacgttttgtccaggaagttgtctaaaagggattgaatttgttgttgcctaattgttttttgttaGGTTTCCACaatactttccttccatctatagcatttcgtaatattatttatttcctttggctttgatgcctcacaATTGAGTATTGTTCTGTAAAGTAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC109067500

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU531790 True 345 lncRNA 0.34 1 5091578 5091922

Neighbor

gene id symbol gene type direction distance location
bmp2k LOC106585926 coding upstream 156129 4842875 ~ 4935449 (+)
LOC118964809 NA coding upstream 173487 4914866 ~ 4918091 (+)
LOC110525174 gpx8 coding upstream 299155 4790838 ~ 4792423 (+)
LOC110525169 LOC106585939 coding upstream 440707 4643954 ~ 4650871 (+)
LOC118964808 NA coding upstream 497388 4592804 ~ 4594190 (+)
prdm8b LOC106585925 coding downstream 487852 5579774 ~ 5585518 (+)
LOC118965066 LOC106585924 coding downstream 531178 5623100 ~ 5624315 (+)
LOC118964810 LOC106585924 coding downstream 565346 5657268 ~ 5658483 (+)
LOC110525066 LOC106585873 coding downstream 906904 5998826 ~ 6036553 (+)
LOC110510489 LOC106593421 coding downstream 968686 6060608 ~ 6147999 (+)
G468000 NA non-coding upstream 37171 5054155 ~ 5054407 (+)
G467993 NA non-coding upstream 48789 5042566 ~ 5042789 (+)
G467988 NA non-coding upstream 57471 5033895 ~ 5034107 (+)
G467986 NA non-coding upstream 59864 5031288 ~ 5031714 (+)
G467983 NA non-coding upstream 63157 5027886 ~ 5028421 (+)
G468030 NA non-coding downstream 5425 5097347 ~ 5098584 (+)
G468033 NA non-coding downstream 16262 5108184 ~ 5108432 (+)
G468066 NA non-coding downstream 57149 5149071 ~ 5149538 (+)
G468076 NA non-coding downstream 61817 5153739 ~ 5153949 (+)
G468077 NA non-coding downstream 62582 5154504 ~ 5154835 (+)
G466813 NA other upstream 1318238 3772864 ~ 3773340 (+)
G465578 NA other upstream 2109153 2978842 ~ 2982425 (+)
LOC110525071 LOC106585963 other upstream 2257468 2743964 ~ 2866482 (+)
zfr zfr other upstream 2682320 2342330 ~ 2451362 (+)
G468732 NA other downstream 1016457 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 1102850 6194772 ~ 6199155 (+)
G468755 NA other downstream 1118277 6210199 ~ 6244501 (+)
G468768 NA other downstream 1162554 6254476 ~ 6371873 (+)
G468791 NA other downstream 1285717 6350096 ~ 6379704 (+)

Expression


Co-expression Network