G468030


Basic Information

Item Value
gene id G468030
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 5097347 ~ 5098584 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU531797
ggttataactccaaccctgttcctggagagataccatgatataggttataactccaaccctgttcctggagagataccatgatataggttataactccaaccctgttcctggagagataccatgatgtaggttataactccaaccctgttcctggagagctaccatgatataggttataactccatccctgttcctggagagataccatgatataggttataactccaaccctgttcctggagagataccatgatataggttataactccaaccctgttcctggagagataccatgatataggttataactccaaccctgttcctggagagataccatgatataggttataactccaaccctgttcctggagagataccatgatataggttataactccatccctgttcctggagagataccatgatataggttataactccatccctgttcctggagagctat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU531797 True 464 lncRNA 0.43 3 5097347 5098584

Neighbor

gene id symbol gene type direction distance location
bmp2k LOC106585926 coding upstream 161898 4842875 ~ 4935449 (+)
LOC118964809 NA coding upstream 179256 4914866 ~ 4918091 (+)
LOC110525174 gpx8 coding upstream 304924 4790838 ~ 4792423 (+)
LOC110525169 LOC106585939 coding upstream 446476 4643954 ~ 4650871 (+)
LOC118964808 NA coding upstream 503157 4592804 ~ 4594190 (+)
prdm8b LOC106585925 coding downstream 481190 5579774 ~ 5585518 (+)
LOC118965066 LOC106585924 coding downstream 524516 5623100 ~ 5624315 (+)
LOC118964810 LOC106585924 coding downstream 558684 5657268 ~ 5658483 (+)
LOC110525066 LOC106585873 coding downstream 900242 5998826 ~ 6036553 (+)
LOC110510489 LOC106593421 coding downstream 962024 6060608 ~ 6147999 (+)
G468025 NA non-coding upstream 5425 5091578 ~ 5091922 (+)
G468000 NA non-coding upstream 42940 5054155 ~ 5054407 (+)
G467993 NA non-coding upstream 54558 5042566 ~ 5042789 (+)
G467988 NA non-coding upstream 63240 5033895 ~ 5034107 (+)
G467986 NA non-coding upstream 65633 5031288 ~ 5031714 (+)
G468033 NA non-coding downstream 9600 5108184 ~ 5108432 (+)
G468066 NA non-coding downstream 50487 5149071 ~ 5149538 (+)
G468076 NA non-coding downstream 55155 5153739 ~ 5153949 (+)
G468077 NA non-coding downstream 55920 5154504 ~ 5154835 (+)
G468096 NA non-coding downstream 81028 5179612 ~ 5181167 (+)
G466813 NA other upstream 1324007 3772864 ~ 3773340 (+)
G465578 NA other upstream 2114922 2978842 ~ 2982425 (+)
LOC110525071 LOC106585963 other upstream 2263237 2743964 ~ 2866482 (+)
zfr zfr other upstream 2688089 2342330 ~ 2451362 (+)
G468732 NA other downstream 1009795 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 1096188 6194772 ~ 6199155 (+)
G468755 NA other downstream 1111615 6210199 ~ 6244501 (+)
G468768 NA other downstream 1155892 6254476 ~ 6371873 (+)
G468791 NA other downstream 1279055 6350096 ~ 6379704 (+)

Expression


Co-expression Network