G468140


Basic Information

Item Value
gene id G468140
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 5215493 ~ 5215702 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU531929
GTCTCATATTATAGAAGAGGATTAAACTGTTAGGAGGTAGTCTGATATTATAGAAGAGGATTAAACTGTTAGGAGGTAGTCTCATAATGTAGAAGAGGATTAATCTGTTAGGAGGTAGTCTCATATTATAGAAGAGGATTCAACTGTTAGGAGGTAGTCTCATATTATAGAAGAGATTTAATCTGTTAGGAGGTAGTCTCATATTATAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU531929 True 210 lncRNA 0.33 1 5215493 5215702

Neighbor

gene id symbol gene type direction distance location
bmp2k LOC106585926 coding upstream 280044 4842875 ~ 4935449 (+)
LOC118964809 NA coding upstream 297402 4914866 ~ 4918091 (+)
LOC110525174 gpx8 coding upstream 423070 4790838 ~ 4792423 (+)
LOC110525169 LOC106585939 coding upstream 564622 4643954 ~ 4650871 (+)
LOC118964808 NA coding upstream 621303 4592804 ~ 4594190 (+)
prdm8b LOC106585925 coding downstream 364072 5579774 ~ 5585518 (+)
LOC118965066 LOC106585924 coding downstream 407398 5623100 ~ 5624315 (+)
LOC118964810 LOC106585924 coding downstream 441566 5657268 ~ 5658483 (+)
LOC110525066 LOC106585873 coding downstream 783124 5998826 ~ 6036553 (+)
LOC110510489 LOC106593421 coding downstream 844906 6060608 ~ 6147999 (+)
G468139 NA non-coding upstream 115 5215014 ~ 5215378 (+)
G468131 NA non-coding upstream 4854 5210417 ~ 5210639 (+)
G468102 NA non-coding upstream 25992 5189297 ~ 5189501 (+)
G468096 NA non-coding upstream 34326 5179612 ~ 5181167 (+)
G468077 NA non-coding upstream 60658 5154504 ~ 5154835 (+)
G468165 NA non-coding downstream 22714 5238416 ~ 5238632 (+)
G468179 NA non-coding downstream 37535 5253237 ~ 5253636 (+)
G468199 NA non-coding downstream 67773 5283475 ~ 5283957 (+)
G468218 NA non-coding downstream 82699 5298401 ~ 5298620 (+)
G468219 NA non-coding downstream 83104 5298806 ~ 5299151 (+)
G466813 NA other upstream 1442153 3772864 ~ 3773340 (+)
G465578 NA other upstream 2233068 2978842 ~ 2982425 (+)
LOC110525071 LOC106585963 other upstream 2381383 2743964 ~ 2866482 (+)
zfr zfr other upstream 2806235 2342330 ~ 2451362 (+)
G468732 NA other downstream 892677 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 979070 6194772 ~ 6199155 (+)
G468755 NA other downstream 994497 6210199 ~ 6244501 (+)
G468768 NA other downstream 1038774 6254476 ~ 6371873 (+)
G468791 NA other downstream 1161937 6350096 ~ 6379704 (+)

Expression


Co-expression Network