G468199


Basic Information

Item Value
gene id G468199
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 5283475 ~ 5283957 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532019
ACTGGTGCTAAACAGTTTAACAGTGTGATCTCACTGGTGCTAAACAGATTAACAGTGTGATCTCACTGGTGCTAAACAGATTAACAGTGTGATCTCACTGGTGCTAAACAGTTTAACAGTGTGATCTCACTGGTGCTAAACAGTTTAACAGTGTGATCTCACTGGTGCTAAACAGTTTAACAGTGTGATCTCACTGGTGCTAAAGAGATTAACAGTGTGACCTCACTGGTGCTAAACAGTTTAACAGTGTGATCTCACTGGTGCTAAACAGATTAACAGTGTGATCTCACTGGTGCTAAACAGTTTAACAGTGTGACCTCACTGGTGCTAAACAGTTTAACAGTGTGATCTCACTGGTGCTAAACAGTTTAACAGTGTGATCTCACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532019 True 387 lncRNA 0.41 2 5283475 5283957

Neighbor

gene id symbol gene type direction distance location
bmp2k LOC106585926 coding upstream 348026 4842875 ~ 4935449 (+)
LOC118964809 NA coding upstream 365384 4914866 ~ 4918091 (+)
LOC110525174 gpx8 coding upstream 491052 4790838 ~ 4792423 (+)
LOC110525169 LOC106585939 coding upstream 632604 4643954 ~ 4650871 (+)
LOC118964808 NA coding upstream 689285 4592804 ~ 4594190 (+)
prdm8b LOC106585925 coding downstream 295817 5579774 ~ 5585518 (+)
LOC118965066 LOC106585924 coding downstream 339143 5623100 ~ 5624315 (+)
LOC118964810 LOC106585924 coding downstream 373311 5657268 ~ 5658483 (+)
LOC110525066 LOC106585873 coding downstream 714869 5998826 ~ 6036553 (+)
LOC110510489 LOC106593421 coding downstream 776651 6060608 ~ 6147999 (+)
G468179 NA non-coding upstream 29839 5253237 ~ 5253636 (+)
G468165 NA non-coding upstream 44843 5238416 ~ 5238632 (+)
G468140 NA non-coding upstream 67773 5215493 ~ 5215702 (+)
G468139 NA non-coding upstream 68097 5215014 ~ 5215378 (+)
G468131 NA non-coding upstream 72836 5210417 ~ 5210639 (+)
G468218 NA non-coding downstream 14444 5298401 ~ 5298620 (+)
G468219 NA non-coding downstream 14849 5298806 ~ 5299151 (+)
G468221 NA non-coding downstream 15483 5299440 ~ 5299829 (+)
G468238 NA non-coding downstream 30002 5313959 ~ 5314176 (+)
G468244 NA non-coding downstream 32106 5316063 ~ 5317523 (+)
G466813 NA other upstream 1510135 3772864 ~ 3773340 (+)
G465578 NA other upstream 2301050 2978842 ~ 2982425 (+)
LOC110525071 LOC106585963 other upstream 2449365 2743964 ~ 2866482 (+)
zfr zfr other upstream 2874217 2342330 ~ 2451362 (+)
G468732 NA other downstream 824422 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 910815 6194772 ~ 6199155 (+)
G468755 NA other downstream 926242 6210199 ~ 6244501 (+)
G468768 NA other downstream 970519 6254476 ~ 6371873 (+)
G468791 NA other downstream 1093682 6350096 ~ 6379704 (+)

Expression


Co-expression Network