G468218


Basic Information

Item Value
gene id G468218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 5298401 ~ 5298620 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532039
CCATTAGGGTCCTCTTCACTGACTTTAGATCCATTAGGGTCCTCTTCACTGACTTTAGATCCATTAGGGTCCTCTTCACTGACTTTAGATCCATTAGGGTCCTCTTCACTGACTTTAGATCCATTAGGGTCCTTTTCACTGACTTTAGATCCATTAGGGTCCTCTGCACTGACTTCAGATCCAATAGGGTCCTCTTCACTGACTTTAGATCCATTAGGGT

Function

NR:

description
PREDICTED: variable charge X-linked protein 3B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532039 True 220 lncRNA 0.44 1 5298401 5298620

Neighbor

gene id symbol gene type direction distance location
bmp2k LOC106585926 coding upstream 362952 4842875 ~ 4935449 (+)
LOC118964809 NA coding upstream 380310 4914866 ~ 4918091 (+)
LOC110525174 gpx8 coding upstream 505978 4790838 ~ 4792423 (+)
LOC110525169 LOC106585939 coding upstream 647530 4643954 ~ 4650871 (+)
LOC118964808 NA coding upstream 704211 4592804 ~ 4594190 (+)
prdm8b LOC106585925 coding downstream 281154 5579774 ~ 5585518 (+)
LOC118965066 LOC106585924 coding downstream 324480 5623100 ~ 5624315 (+)
LOC118964810 LOC106585924 coding downstream 358648 5657268 ~ 5658483 (+)
LOC110525066 LOC106585873 coding downstream 700206 5998826 ~ 6036553 (+)
LOC110510489 LOC106593421 coding downstream 761988 6060608 ~ 6147999 (+)
G468199 NA non-coding upstream 14444 5283475 ~ 5283957 (+)
G468179 NA non-coding upstream 44765 5253237 ~ 5253636 (+)
G468165 NA non-coding upstream 59769 5238416 ~ 5238632 (+)
G468140 NA non-coding upstream 82699 5215493 ~ 5215702 (+)
G468139 NA non-coding upstream 83023 5215014 ~ 5215378 (+)
G468219 NA non-coding downstream 186 5298806 ~ 5299151 (+)
G468221 NA non-coding downstream 820 5299440 ~ 5299829 (+)
G468238 NA non-coding downstream 15339 5313959 ~ 5314176 (+)
G468244 NA non-coding downstream 17443 5316063 ~ 5317523 (+)
G468242 NA non-coding downstream 19728 5318348 ~ 5319703 (+)
G466813 NA other upstream 1525061 3772864 ~ 3773340 (+)
G465578 NA other upstream 2315976 2978842 ~ 2982425 (+)
LOC110525071 LOC106585963 other upstream 2464291 2743964 ~ 2866482 (+)
zfr zfr other upstream 2889143 2342330 ~ 2451362 (+)
G468732 NA other downstream 809759 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 896152 6194772 ~ 6199155 (+)
G468755 NA other downstream 911579 6210199 ~ 6244501 (+)
G468768 NA other downstream 955856 6254476 ~ 6371873 (+)
G468791 NA other downstream 1079019 6350096 ~ 6379704 (+)

Expression


Co-expression Network