G468297


Basic Information

Item Value
gene id G468297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 5434003 ~ 5434649 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532131
CTCTCTTTCCATCTAcctactctctctttccatctaccTACTCTCTTTCCATCTACCTACTATCTACTCTCTTTCCATCTACCTACTATCTACTCTCTTTCCATCTAcctactctctctttccatctaccTACTCTCTTTCCATCTACCTActctctttccatctaccTACTCTCTTTCCATCTACCTACTCTCTTTCCATGTacctactctctctttctatctacctactctctttccatctacctactctctctttccatctaccTACTCTCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532131 True 277 lncRNA 0.41 2 5434003 5434649

Neighbor

gene id symbol gene type direction distance location
bmp2k LOC106585926 coding upstream 498554 4842875 ~ 4935449 (+)
LOC118964809 NA coding upstream 515912 4914866 ~ 4918091 (+)
LOC110525174 gpx8 coding upstream 641580 4790838 ~ 4792423 (+)
LOC110525169 LOC106585939 coding upstream 783132 4643954 ~ 4650871 (+)
LOC118964808 NA coding upstream 839813 4592804 ~ 4594190 (+)
prdm8b LOC106585925 coding downstream 145125 5579774 ~ 5585518 (+)
LOC118965066 LOC106585924 coding downstream 188451 5623100 ~ 5624315 (+)
LOC118964810 LOC106585924 coding downstream 222619 5657268 ~ 5658483 (+)
LOC110525066 LOC106585873 coding downstream 564177 5998826 ~ 6036553 (+)
LOC110510489 LOC106593421 coding downstream 625959 6060608 ~ 6147999 (+)
G468296 NA non-coding upstream 523 5433096 ~ 5433480 (+)
G468290 NA non-coding upstream 19890 5412627 ~ 5414113 (+)
G468242 NA non-coding upstream 114300 5318348 ~ 5319703 (+)
G468244 NA non-coding upstream 116480 5316063 ~ 5317523 (+)
G468238 NA non-coding upstream 119827 5313959 ~ 5314176 (+)
G468369 NA non-coding downstream 24865 5459514 ~ 5459717 (+)
G468371 NA non-coding downstream 28533 5463182 ~ 5509904 (+)
G468381 NA non-coding downstream 88178 5522827 ~ 5523447 (+)
G468388 NA non-coding downstream 96981 5531630 ~ 5531863 (+)
G468404 NA non-coding downstream 113086 5547735 ~ 5593087 (+)
G466813 NA other upstream 1660663 3772864 ~ 3773340 (+)
G465578 NA other upstream 2451578 2978842 ~ 2982425 (+)
LOC110525071 LOC106585963 other upstream 2599893 2743964 ~ 2866482 (+)
zfr zfr other upstream 3024745 2342330 ~ 2451362 (+)
G468732 NA other downstream 673730 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 760123 6194772 ~ 6199155 (+)
G468755 NA other downstream 775550 6210199 ~ 6244501 (+)
G468768 NA other downstream 819827 6254476 ~ 6371873 (+)
G468791 NA other downstream 942990 6350096 ~ 6379704 (+)

Expression


Co-expression Network