G468388


Basic Information

Item Value
gene id G468388
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 5531630 ~ 5531863 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532265
cctggatacagcccttagccgtgggaAATTGGCAACATAACACAAACCCCCCAGAGGttgccttattgttattataaactggttaccaacgtaattagagcagtaaaaacacatttttagtcATACCCGTggcatacggtctgatataccacggctgtcagccaatcagcattcagggctcgaaccacccagtttataatattgtATATGTAATTGACACAAACTCTCCCCTAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532265 True 234 lncRNA 0.43 1 5531630 5531863

Neighbor

gene id symbol gene type direction distance location
bmp2k LOC106585926 coding upstream 596181 4842875 ~ 4935449 (+)
LOC118964809 NA coding upstream 613539 4914866 ~ 4918091 (+)
LOC110525174 gpx8 coding upstream 739207 4790838 ~ 4792423 (+)
LOC110525169 LOC106585939 coding upstream 880759 4643954 ~ 4650871 (+)
LOC118964808 NA coding upstream 937440 4592804 ~ 4594190 (+)
prdm8b LOC106585925 coding downstream 47911 5579774 ~ 5585518 (+)
LOC118965066 LOC106585924 coding downstream 91237 5623100 ~ 5624315 (+)
LOC118964810 LOC106585924 coding downstream 125405 5657268 ~ 5658483 (+)
LOC110525066 LOC106585873 coding downstream 466963 5998826 ~ 6036553 (+)
LOC110510489 LOC106593421 coding downstream 528745 6060608 ~ 6147999 (+)
G468381 NA non-coding upstream 8183 5522827 ~ 5523447 (+)
G468371 NA non-coding upstream 21726 5463182 ~ 5509904 (+)
G468369 NA non-coding upstream 71913 5459514 ~ 5459717 (+)
G468297 NA non-coding upstream 96981 5434003 ~ 5434649 (+)
G468296 NA non-coding upstream 98150 5433096 ~ 5433480 (+)
G468404 NA non-coding downstream 15872 5547735 ~ 5593087 (+)
G468445 NA non-coding downstream 165702 5697565 ~ 5698207 (+)
G468483 NA non-coding downstream 233316 5765179 ~ 5765640 (+)
G468621 NA non-coding downstream 361134 5892997 ~ 5893422 (+)
G468626 NA non-coding downstream 371292 5903155 ~ 5904297 (+)
G466813 NA other upstream 1758290 3772864 ~ 3773340 (+)
G465578 NA other upstream 2549205 2978842 ~ 2982425 (+)
LOC110525071 LOC106585963 other upstream 2697520 2743964 ~ 2866482 (+)
zfr zfr other upstream 3122372 2342330 ~ 2451362 (+)
G468732 NA other downstream 576516 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 662909 6194772 ~ 6199155 (+)
G468755 NA other downstream 678336 6210199 ~ 6244501 (+)
G468768 NA other downstream 722613 6254476 ~ 6371873 (+)
G468791 NA other downstream 845776 6350096 ~ 6379704 (+)

Expression


Co-expression Network