G468668


Basic Information

Item Value
gene id G468668
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 5925406 ~ 5926834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532648
gtaCTACGAGGAATAGGGTCCATTTGGGTTTAGACCACAGTACTACGAGGAATAGGGTCCACTTGGGTTTAGACCACAGTACTACGAGGAATAGGGTCCATTTGGGTTTAGACCACAGTACTACGAGGAATAGGGTCCATTTGGAAACACTGGGCAATATCAAGAGAAACGAAATATTAAATCAAATCCAttccaagtttatttgtcacgtgcgccgaatacaacaggtgtagtagaccttacagtgaaatactgaatacaacaggtgtagtagaccttacagcgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtattagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagttgaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtagaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtatagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctgacagtgaaatgctgaatacaacaggtgtagtagaactcACAGTGAAAtatttacttacaggctctaaccaatagtgcaacaaaggtattaggtgaacaataggtaaataaagaaataaaaacaacagtagagaggctatttacagtagaggttatatacagtagtgaggctatatacagtagaggttatatacagtagatagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532648 True 1395 lncRNA 0.39 2 5925406 5926834

Neighbor

gene id symbol gene type direction distance location
LOC118964810 LOC106585924 coding upstream 266923 5657268 ~ 5658483 (+)
LOC118965066 LOC106585924 coding upstream 301091 5623100 ~ 5624315 (+)
prdm8b LOC106585925 coding upstream 339888 5579774 ~ 5585518 (+)
bmp2k LOC106585926 coding upstream 989957 4842875 ~ 4935449 (+)
LOC110525066 LOC106585873 coding downstream 71992 5998826 ~ 6036553 (+)
LOC110510489 LOC106593421 coding downstream 133774 6060608 ~ 6147999 (+)
LOC118964812 LOC106607869 coding downstream 151343 6078177 ~ 6088723 (+)
LOC118964813 NA coding downstream 240109 6166943 ~ 6173411 (+)
LOC110510500 LOC106607873 coding downstream 297420 6224254 ~ 6231849 (+)
G468626 NA non-coding upstream 21109 5903155 ~ 5904297 (+)
G468621 NA non-coding upstream 31984 5892997 ~ 5893422 (+)
G468483 NA non-coding upstream 159766 5765179 ~ 5765640 (+)
G468445 NA non-coding upstream 227199 5697565 ~ 5698207 (+)
G468404 NA non-coding upstream 332319 5547735 ~ 5593087 (+)
G468673 NA non-coding downstream 11667 5938501 ~ 5941493 (+)
G468676 NA non-coding downstream 20929 5947763 ~ 5949067 (+)
G468693 NA non-coding downstream 49516 5976350 ~ 5976796 (+)
G468690 mrpl1 non-coding downstream 55931 5982765 ~ 5997048 (+)
G468702 NA non-coding downstream 79311 6006145 ~ 6013756 (+)
G466813 NA other upstream 2152066 3772864 ~ 3773340 (+)
G465578 NA other upstream 2942981 2978842 ~ 2982425 (+)
LOC110525071 LOC106585963 other upstream 3091296 2743964 ~ 2866482 (+)
zfr zfr other upstream 3516148 2342330 ~ 2451362 (+)
G468732 NA other downstream 181545 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 267938 6194772 ~ 6199155 (+)
G468755 NA other downstream 283365 6210199 ~ 6244501 (+)
G468768 NA other downstream 327642 6254476 ~ 6371873 (+)
G468791 NA other downstream 450805 6350096 ~ 6379704 (+)

Expression


Co-expression Network