G468732


Basic Information

Item Value
gene id G468732
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6108379 ~ 6156681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532741
GATCCGTTGTATGGAGATATTCAATATCCCCTAAAAAACCTTTAAAAGAACAAACATTCAAAGTAAAGAGACCAGACACCTGCCCTTCTGATGCTCCCAGTAGTAAAGAGACCAGACACCTGCCCTTCTGATGCTCCCAGTAGTAAAGAGACCAGACACCTGCCCTTCTGATGCTCCCAGTAGTAAAGAGACCAGACACCTGCCCTTCTGATGCTCCCAGTAGTAAAGAGACCAGACACCTGCCCTTCTGATGCTCCCAGTAGTAAAGAGACCAGACACCTGCCCTTCTGATGCTATCAGTAAAGCGGGAGGAGACTGTCAGCAGTGCTCTTGTTTCACTGGAAGCTGATGAAGATACCGAGGTCGGTACAGATGGTGCACTTGCAATTGCGCCAGTTCAAGTAAAGCTGGAAAATGGAAGCAAGTCTGTGTTAACCAATGCATTTGTTGATTCTGGTAGTTTAGCAACATTTTGTACTGAGAGACTCATGATGCAGCTGAAAGCTAAAGGCAGtgagactgatattctgcaacaCAATGAGGCATTAGAGTCCTACCAAGAGCTTTGAGATATCTGGGTTAGAGATTGGCAAAGTGGAAGGAGACATTTCTTGCTCTATCAAAGCAAATTCTACGAGCTCTGCAAGCTAAAGTGCGGATGGGACGAAGTCATCCCAAAGAACACTCTATTTCATGGAAGAAATGGCTCTGAGCTGGACCAGCTGTCCAGTTTCCAGATTGACAGGTGTATGATGCCTGAGAACTTTGGTCAAGTCAAGACCGCAAAGCTGCATCACTTCGGTGACGCGAGAGAACAAGGTTATGGCACGGCAAGTTACCTTGGGTTCACAAACGATATGGAAAAGGTCCACATCCCATTCATACTGGGGAGATCAAGAGTGACTCCACTCAAGCAGATGATCCCCAGACTGGAACTTGATGCAGCAACATTGGAGGTGCCATTGGACAGGATGTTAAGGTTGGAGCTCCAGATTGAACTTGATGCAGCAACATTGGAGGTGCCAGTGGACAGGATGTTAAGGT
>TU532738
GAGAGAAGACCCCTGAGAGCCCAGTTCAGTGACCTTGTGACGTTCATGGAAAAACAGGCCAAAATATTGCAGGATCCGTTGTATGGAGATATTCAATATCCCCTGGCCAACAAAAGGTTTTAAAAAACCCAAAACATCAGCAGATTCTAAACAGCAGTTCAAGTCCAAGAGTAGGGGAAGCAGCTTTGCCACTGCAGTAGATGTAGTGTCAGTTTACGACTCTAAAAAACCTTTAAAAGAACAAACATTCAAAGTAAAGAGACCAGACACCTGCCCTTCTGATGCTCCCAGTAGTAAAGAGACCAGACACCTGCCCTTCTGATGCTATCAGTAAAGCGGGAGGAGACTGTCAGCAGTGCTCTTGTTTCACTGGAAGCTGATGAAGATACCGAGGTCGGTACAGATGGTGCACTTGCAATTGCGCCAGTTCAAGTAAAGCTGGAAAATGGAAGCAAGTCTGTGTTAACCAATGCATTTGTTGATTCTGGTAGTTTAGCAACATTTTGTACTGAGAGACTCATGATGCAGCTGAAAGCTAAAGGCAGtgagactgatattctgcaacaCAATGAGGCATTAGAGTCCTACCAAGAGCTTTGAGATATCTGGGTTAGAGATTGGCAAAGTGGAAGGAGACATTTCTTGCTCTATCAAAGCAAATTCTACGAGCTCTGCAAGCTAAAGTGCGGATGGGACGAAGTCATCCCAAAGAACACTCTATTTCATGGAAGAAATGGCTCTGAGCTGGACCAGCTGTCCAGTTTCCAGATTGACAGGTGTATGATGCCTGAGAACTTTGGTCAAGTCAAGACCGCAAAGCTGCATCACTTCGGTGACGCGAGAGAACAAGGTTATGGCACGGCAAGTTACCTTGGGTTCACAAACGATATGGAAAAGGTCCACATCCCATTCATACTGGGGAGATCAAGAGTGACTCCACTCAAGCAGATGATCCCCAGACTGGAACTTGATGCAGCAACATTGGAGGTGCCATTGGACAGGATGTTAAGGTTGGAGCTCCAGATTGAACTTGATGCAGCAACATTGGAGGTGCCAGTGGACAGGATGTTAAGGT
>TU532739
GAGAGAAGACCCCTGAGAGCCCAGTTCAGTGACCTTGTGACGTTCATGGAAAAACAGGCCAAAATATTGCAGGATCCGTTGTATGGAGATATTCAATATCCCCTGGCCAACAAAAGGTTTTAAAAAACCCAAAACATCAGCAGATTCTAAACAGCAGTTCAAGTCCAAGAGTAGGGGAAGCAGCTTTGCCACTGCAGTAGATGTAGTGTCAGTTTACGACTCTAAAAAACCTTTAAAAGAACAAACATTCAAAGTAAAGAGACCAGACACCTGCCCTTCTGATGCTCCCAGTAGTAAAGAGACCAGACACCTGCCCTTCTGATGCTCCCAGTAGTAAAGAGACCAGACACCTGCCCTTCTGATGCTATCAGTAAAGCGGGAGGAGACTGTCAGCAGTGCTCTTGTTTCACTGGAAGCTGATGAAGATACCGAGGTCGGTACAGATGGTGCACTTGCAATTGCGCCAGTTCAAGTAAAGCTGGAAAATGGAAGCAAGTCTGTGTTAACCAATGCATTTGTTGATTCTGGTAGTTTAGCAACATTTTGTACTGAGAGACTCATGATGCAGCTGAAAGCTAAAGGCAGtgagactgatattctgcaacaCAATGAGGCATTAGAGTCCTACCAAGAGCTTTGAGATATCTGGGTTAGAGATTGGCAAAGTGGAAGGAGACATTTCTTGCTCTATCAAAGCAAATTCTACGAGCTCTGCAAGCTAAAGTGCGGATGGGACGAAGTCATCCCAAAGAACACTCTATTTCATGGAAGAAATGGCTCTGAGCTGGACCAGCTGTCCAGTTTCCAGATTGACAGGTGTATGATGCCTGAGAACTTTGGTCAAGTCAAGACCGCAAAGCTGCATCACTTCGGTGACGCGAGAGAACAAGGTTATGGCACGGCAAGTTACCTTGGGTTCACAAACGATATGGAAAAGGTCCACATCCCATTCATACTGGGGAGATCAAGAGTGACTCCACTCAAGCAGATGATCCCCAGACTGGAACTTGATGCAGCAACATTGGAGGTGCCATTGGACAGGATGTTAAGGTTGGAGCTCCAGATTGAACTTGATGCAGCAACATTGGAGGTGCCAGTGGACAGGATGTTAAGGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106588270

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532741 False 1044 TUCP 0.47 3 6108379 6156681
TU532738 False 1075 TUCP 0.46 2 6155447 6156681
TU532739 True 1115 TUCP 0.46 2 6155447 6156681

Neighbor

gene id symbol gene type direction distance location
LOC118964812 LOC106607869 coding upstream 19656 6078177 ~ 6088723 (+)
LOC110525066 LOC106585873 coding upstream 71826 5998826 ~ 6036553 (+)
LOC118964810 LOC106585924 coding upstream 449896 5657268 ~ 5658483 (+)
LOC118965066 LOC106585924 coding upstream 484064 5623100 ~ 5624315 (+)
prdm8b LOC106585925 coding upstream 522861 5579774 ~ 5585518 (+)
LOC118964813 NA coding downstream 10262 6166943 ~ 6173411 (+)
LOC110510500 LOC106607873 coding downstream 67573 6224254 ~ 6231849 (+)
LOC110518225 LOC106607873 coding downstream 266460 6423141 ~ 6428139 (+)
LOC118964815 LOC106607873 coding downstream 325331 6482012 ~ 6488606 (+)
LOC110525188 NA coding downstream 452240 6608921 ~ 6609844 (+)
G468731 NA non-coding upstream 3787 6100902 ~ 6104592 (+)
G468729 NA non-coding upstream 10266 6097800 ~ 6098113 (+)
G468714 NA non-coding upstream 64606 6043290 ~ 6043773 (+)
G468710 NA non-coding upstream 72863 6035292 ~ 6035516 (+)
G468747 NA non-coding downstream 23552 6180233 ~ 6205812 (+)
G468753 NA non-coding downstream 33476 6190157 ~ 6192605 (+)
G468635 NA non-coding downstream 43478 6200159 ~ 6201970 (+)
G468660 NA non-coding downstream 45397 6202078 ~ 6242781 (+)
G466813 NA other upstream 2335039 3772864 ~ 3773340 (+)
G465578 NA other upstream 3125954 2978842 ~ 2982425 (+)
LOC110525071 LOC106585963 other upstream 3274269 2743964 ~ 2866482 (+)
zfr zfr other upstream 3699121 2342330 ~ 2451362 (+)
G465355 NA other upstream 3702289 2405119 ~ 2406090 (+)
G468643 LOC106607869 other downstream 38091 6194772 ~ 6199155 (+)
G468755 NA other downstream 53518 6210199 ~ 6244501 (+)
G468768 NA other downstream 97795 6254476 ~ 6371873 (+)
G468791 NA other downstream 220958 6350096 ~ 6379704 (+)
G468765 LOC106607873 other downstream 266733 6423414 ~ 6488418 (+)

Expression


Co-expression Network