G468643 (LOC106607869)


Basic Information

Item Value
gene id G468643
gene name LOC106607869
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6194772 ~ 6199155 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532623
gtggtgtgtgtgtgtgtttggagtattcaggagttgtgtgtgtgtgtgtgtggagtatttGTGGAAACTatgaactctgctccctctcctctctctTCTTCTACCTCTCCATGTATCCCAGCACTTCTTCAGGCTAGTTACAATAACTCATTTACACATTTCCCTCAGTCTTTCTATCAGTCCCTCTATATCTCCATCCCTTTCCACAAtcactctatccttctcctcgatctctctatccttctccttCATCTGTCTATCCTTCTCCTTCATCTGTCTATCCTTCTCCTTCATCTGTCTATtcttctcctccatctgtctGCTGAACTCCCTCTCCATCTTTGTCTGTGAGATCATGATGTTCCTCTGTAACTCAGGTAGGACTATCTTCATCAGGTTTCTCTCTGCTTCAACTCTGGCCTGTCCTTCATAGTTCTCCAtctcctgtctgtgtctctcctccatctcactcctctcattctctctcttctctctaaatctctccagctttctctccatctcctccctcctatcAGACTCCCTCTTCAGCTCCCTCTCCagctctcttttcttctcctcatccctctcttctttcacCTGTCTCTCCAGTTCACTGGTTCTTTCACTGAGTGTTCTGATATCTCCCTCATGTTCCTGGATCACTCCCTCTATCTTTATCAGAGAGTCCTGCAACTCCTTCTGAAGCCTCTCTCTcaagtctctctcctccctctgtttcctctctcctctctctctctggatgtttCCCTCCATCTTTCTAACCTGGTCCTCTGCCTCCTGGTAGGTCTGACTGCTGTagaatctctctctgtttcctgccaccatctcctctacctgatcCAGCAGCTCTGATACCTGAGTGCCATGGGCCCTGTCCTTAATGTTGAGGACGTGGTACCTGCTCCCACTTTTCTCCACAAGCTGCTGGAGGTCCTGACTTCCTGCTTGGAGAAACTCCTCAATGCTCTGCTCTTTCAGGCCATCATCATGGGTGAATAGAATCACAGTGTGTCCCCAACAACCCTCCCCAAacatctcctctattctctccagcacccctctctcctcccccttagaGGGCTCCACTGGTATGACCAGGAGGAAGGCGTGGGGTCCCGgggcagacagacggacacagagCCCCACATCCTGTCTCATCTCCTCCAGAGAGAGTCCAGGACAGAACCAGTCTGGAGTGTCCACCAGCACCAGCCGTCTCCCACACacgtccccctctctcctcttactCCTCTGGGTCACTGCAGAGGGGCTGGCCTGGGCCCCAAACTCCTCTCTGCCCAGGATGGTGTTTCCTGCTGCACTCCTCCCAGCCCCAGTCCTCCCCAGCAGCACCAGTCTCAGCTCAGACACACTGGGAGACACTGTGGAGTCTGGactgctgctctctcct

Function

NR:

description
trichohyalin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532623 True 1432 TUCP 0.52 2 6194772 6199155

Neighbor

gene id symbol gene type direction distance location
LOC118964813 NA coding upstream 21361 6166943 ~ 6173411 (+)
LOC110510489 LOC106593421 coding upstream 46773 6060608 ~ 6147999 (+)
LOC118964812 LOC106607869 coding upstream 106049 6078177 ~ 6088723 (+)
LOC110525066 LOC106585873 coding upstream 158219 5998826 ~ 6036553 (+)
LOC118964810 LOC106585924 coding upstream 536289 5657268 ~ 5658483 (+)
LOC110510500 LOC106607873 coding downstream 25099 6224254 ~ 6231849 (+)
LOC110518225 LOC106607873 coding downstream 223986 6423141 ~ 6428139 (+)
LOC118964815 LOC106607873 coding downstream 282857 6482012 ~ 6488606 (+)
LOC110525188 NA coding downstream 409766 6608921 ~ 6609844 (+)
ydjc ydjc coding downstream 483752 6682907 ~ 6692547 (+)
G468753 NA non-coding upstream 2167 6190157 ~ 6192605 (+)
G468733 NA non-coding upstream 37686 6109772 ~ 6157086 (+)
G468659 NA non-coding upstream 39354 6101746 ~ 6155418 (+)
G468735 NA non-coding upstream 78994 6114481 ~ 6115778 (+)
G468635 NA non-coding downstream 1004 6200159 ~ 6201970 (+)
G468660 NA non-coding downstream 2923 6202078 ~ 6242781 (+)
G468754 NA non-coding downstream 5927 6205082 ~ 6209705 (+)
G468764 NA non-coding downstream 28787 6227942 ~ 6228783 (+)
G468732 NA other upstream 38091 6108379 ~ 6156681 (+)
G466813 NA other upstream 2421432 3772864 ~ 3773340 (+)
G465578 NA other upstream 3212347 2978842 ~ 2982425 (+)
LOC110525071 LOC106585963 other upstream 3360662 2743964 ~ 2866482 (+)
zfr zfr other upstream 3785514 2342330 ~ 2451362 (+)
G468755 NA other downstream 11044 6210199 ~ 6244501 (+)
G468768 NA other downstream 55321 6254476 ~ 6371873 (+)
G468791 NA other downstream 178484 6350096 ~ 6379704 (+)
G468765 LOC106607873 other downstream 224259 6423414 ~ 6488418 (+)
G468841 LOC106590901 other downstream 351822 6550977 ~ 6557058 (+)

Expression


Co-expression Network