G468789


Basic Information

Item Value
gene id G468789
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6336953 ~ 6365890 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532818
TTCTCCAGTCCTCATTGTTTTAAAACAGGACTGTTGTGTCTAGTTTGGAAAGTGAAATATACTGAGATCTCCTCTTACCTTTACTGGTCTTCACGTCCTCCACTTCACACTCAAAATAGTTGATTTAAATCTATAACCACTCTAATAGTCACTATATGTGCATATCTACACATTTTTACAGAACAATCTACACCTCAGTCCTATACTGAGACACAACTTTCCCCTTTGCTCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532818 True 234 lncRNA 0.38 2 6336953 6365890

Neighbor

gene id symbol gene type direction distance location
LOC110510500 LOC106607873 coding upstream 105553 6224254 ~ 6231849 (+)
LOC118964813 NA coding upstream 163542 6166943 ~ 6173411 (+)
LOC110510489 LOC106593421 coding upstream 188954 6060608 ~ 6147999 (+)
LOC118964812 LOC106607869 coding upstream 248230 6078177 ~ 6088723 (+)
LOC110525066 LOC106585873 coding upstream 300400 5998826 ~ 6036553 (+)
LOC110518225 LOC106607873 coding downstream 57251 6423141 ~ 6428139 (+)
LOC118964815 LOC106607873 coding downstream 116122 6482012 ~ 6488606 (+)
LOC110525188 NA coding downstream 243031 6608921 ~ 6609844 (+)
ydjc ydjc coding downstream 317017 6682907 ~ 6692547 (+)
ccl19a.2 LOC106585882 coding downstream 345004 6710688 ~ 6713091 (+)
G468647 LOC106607872 non-coding upstream 3094 6302128 ~ 6333859 (+)
G468785 NA non-coding upstream 20586 6293208 ~ 6316367 (+)
G468770 NA non-coding upstream 75474 6257968 ~ 6261479 (+)
G468660 NA non-coding upstream 94172 6202078 ~ 6242781 (+)
G468794 NA non-coding downstream 6253 6372143 ~ 6373052 (+)
G468795 NA non-coding downstream 16679 6382569 ~ 6386729 (+)
G468796 NA non-coding downstream 25093 6390983 ~ 6391254 (+)
G468636 NA non-coding downstream 37011 6402901 ~ 6447019 (+)
G468641 NA non-coding downstream 42504 6408394 ~ 6466268 (+)
G468755 NA other upstream 92452 6210199 ~ 6244501 (+)
G468643 LOC106607869 other upstream 137798 6194772 ~ 6199155 (+)
G468732 NA other upstream 180272 6108379 ~ 6156681 (+)
G466813 NA other upstream 2563613 3772864 ~ 3773340 (+)
G465578 NA other upstream 3354528 2978842 ~ 2982425 (+)
G468791 NA other downstream 11749 6350096 ~ 6379704 (+)
G468765 LOC106607873 other downstream 57524 6423414 ~ 6488418 (+)
G468841 LOC106590901 other downstream 185087 6550977 ~ 6557058 (+)
G468887 sdf2l other downstream 306618 6672508 ~ 6674387 (+)

Expression


Co-expression Network