G468769


Basic Information

Item Value
gene id G468769
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6338339 ~ 6368451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532798
AAAACATTCAATGAGATCCAGGGATATGGTGCAACAAAAAGGTTTATTCTTATTATATCTCACAAAAAAACATATTCTCCCATCAACTTAAAGCATAGATTACTTCACGTGAAAAATACATAATATGACCTGTTTGTTGTCTGGTTAAAAGACTATACCACTCCCGTGTCTAGCTAGGACTCCCCCTCCCCCGAAGGCCCAACTTCCTGTCTTTATCCTGTCGCTAACACACTGACCACAGTACAATGAATGGTCAAGAGGAGGAGCTAAAACCTAAGGTACACTTATAACAAAGGAATATATCTCAATGAGGTCAATATAAATCATCAAGGTACCTGATATTTCATCATATACATTCATATTTCATATATTTACACACCTTTACATGGAGCTCTGTATGTTCTGTCTTTTATAGAAATATGTCCACATCGGCTCTAACATACCGGCCCATAATTGTTAACAGCACTGAAAACATTACAGTTActtaatatttaaaaaatagaGCCAATTCACAAAACATTCTATACCAGAGCACTATTACGGTTCATagctacactaccgttcaaagtttggggtaacttagaaatgtccttgtttttgaaagaaaagcatttttttttgtccattcaaataacatcaaattgatcagaaatacagtgtagacattgttaatgttgtaaatgactattgtagctggaaacggctgatttttaatggaatatctacataggtgtacagagaaCCATTATCAgcaaaccatcactcctgtgttccaatggcacgttgtgttagctaatccaagtttatcattttaaaaaggctaactaatcattgtaattatgttagcacagctgaaaactgttgttctgattaaagaagcagtaaaactggccttctttagactagttgagcatctggagcatcagcatttgtgggttcgattacaggctcaaaatggtcagaaacaaagactttcttctgaaacttgtcagtctattctggttctgagaaatgaaggctattccatgtgagaaaatgccaagaaactgaaaatctcatacaacgctgTGTACTTcaaagaacagcgcaaactgtctctaaccagaagagaaagagtgggaggccccggtgcacaactgagcaagaggacaagtacattagagtgtgtagtttgagaaacagatgtctcacaagtcctcaactggcagcttcaccCCATAATggaagagttgcaaagaaaaagtcatatttctgtccagtgtctgtgttcttttgcccatcttaatctttcctttttattggccagtctgagatgtggctttttctttgcaactctgcctagaaggccagcatcctggagtcgcctcgtcactgttgacgttgagattggtgttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532798 True 1395 lncRNA 0.38 2 6338339 6368451

Neighbor

gene id symbol gene type direction distance location
LOC110510500 LOC106607873 coding upstream 106939 6224254 ~ 6231849 (+)
LOC118964813 NA coding upstream 164928 6166943 ~ 6173411 (+)
LOC110510489 LOC106593421 coding upstream 190340 6060608 ~ 6147999 (+)
LOC118964812 LOC106607869 coding upstream 249616 6078177 ~ 6088723 (+)
LOC110525066 LOC106585873 coding upstream 301786 5998826 ~ 6036553 (+)
LOC110518225 LOC106607873 coding downstream 54690 6423141 ~ 6428139 (+)
LOC118964815 LOC106607873 coding downstream 113561 6482012 ~ 6488606 (+)
LOC110525188 NA coding downstream 240470 6608921 ~ 6609844 (+)
ydjc ydjc coding downstream 314456 6682907 ~ 6692547 (+)
ccl19a.2 LOC106585882 coding downstream 342443 6710688 ~ 6713091 (+)
G468647 LOC106607872 non-coding upstream 4480 6302128 ~ 6333859 (+)
G468785 NA non-coding upstream 21972 6293208 ~ 6316367 (+)
G468770 NA non-coding upstream 76860 6257968 ~ 6261479 (+)
G468660 NA non-coding upstream 95558 6202078 ~ 6242781 (+)
G468794 NA non-coding downstream 3692 6372143 ~ 6373052 (+)
G468795 NA non-coding downstream 14118 6382569 ~ 6386729 (+)
G468796 NA non-coding downstream 22532 6390983 ~ 6391254 (+)
G468636 NA non-coding downstream 34450 6402901 ~ 6447019 (+)
G468641 NA non-coding downstream 39943 6408394 ~ 6466268 (+)
G468755 NA other upstream 93838 6210199 ~ 6244501 (+)
G468643 LOC106607869 other upstream 139184 6194772 ~ 6199155 (+)
G468732 NA other upstream 181658 6108379 ~ 6156681 (+)
G466813 NA other upstream 2564999 3772864 ~ 3773340 (+)
G465578 NA other upstream 3355914 2978842 ~ 2982425 (+)
G468791 NA other downstream 9188 6350096 ~ 6379704 (+)
G468765 LOC106607873 other downstream 54963 6423414 ~ 6488418 (+)
G468841 LOC106590901 other downstream 182526 6550977 ~ 6557058 (+)
G468887 sdf2l other downstream 304057 6672508 ~ 6674387 (+)

Expression


Co-expression Network