G468662


Basic Information

Item Value
gene id G468662
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6343996 ~ 6345224 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532642
attacaacaacctctaagatagagtgcatagcattacaacaacctagatagagtgcatagcattacaacaacctctaagatagagtgcatagcattacaacaacttAGATAGACTGCaaagcattacaacaacctagatagagtgcatagcattacaacaacctagatagagtgcatagcattacaacaacttAGATAgactgcatagcattacaacaacctagatagagtgcatagcattacaacaacctctaagatagagtgcatagccaCCCAGTACCTTTCCATCATCTGGTTTGATGTTTGTCCAGTTCCTTTTTCCATGTTAGTAGTGGTGACTTTGATTTCATTGCCAAAGTGTTCCTTTAACAACCTCTTAGACTCCGCGTTGCCTCTTCTGCCTTCTATATGCAGACAACTACAGACCAGATCCTTGGGCTGACCAGAGGTGTACTGTTCCAGGTAATAGAGCCTATCCTGGTGACTGCTGACCAGAGGTGTACTGTTCCAGGTAACAGAGCCTATCCCGGTGACTGCTGGTCTTCTCTTCTATGCCATGCTCAAATGCACGCATGAATGAAAACATAGGTATCTCCCTAACAGCGAGTGTAGCCTGTTTGTGCTGTAGTACAAGGAGGTCAGCAATTTCATTCTGCTTTTGCatgacagtagagaggttatcaTGGCTGGTATTATGGCTGATACTGTCGTAGAAAATCGGTTCAAATATGACACTTGCAAGAACTTGTGAAatcaatataggcttttaatacaacGGAAAGCAAGCCGGagtggtccgcggaacacacgCCTTTTTCAGAGCACTGGCTctgatttatacacatacaacatatgagtccatcccacatgcaaatgaagttacttccctcagtccatctgccaccattatatcccaatctgtgcatcctgcttgttcagctcgataacgcccatatctgctttcagtCAAGTTATAATGGTGACAGGACCTCTTCATGTCCCAAAAATAATACGTGCCtattgttacggtgagtgaatgaggacccaaaagcgaactaacttaaacagagcttctttaataaccaaacataggtaggctcagatagaccggcagattccgacaggacaggacaaggttacagcaaacatgacgatagtctggctcaggcatgaaacacaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106572570

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532642 True 1180 lncRNA 0.43 2 6343996 6345224

Neighbor

gene id symbol gene type direction distance location
LOC110510500 LOC106607873 coding upstream 112596 6224254 ~ 6231849 (+)
LOC118964813 NA coding upstream 170585 6166943 ~ 6173411 (+)
LOC110510489 LOC106593421 coding upstream 195997 6060608 ~ 6147999 (+)
LOC118964812 LOC106607869 coding upstream 255273 6078177 ~ 6088723 (+)
LOC110525066 LOC106585873 coding upstream 307443 5998826 ~ 6036553 (+)
LOC110518225 LOC106607873 coding downstream 77917 6423141 ~ 6428139 (+)
LOC118964815 LOC106607873 coding downstream 136788 6482012 ~ 6488606 (+)
LOC110525188 NA coding downstream 263697 6608921 ~ 6609844 (+)
ydjc ydjc coding downstream 337683 6682907 ~ 6692547 (+)
ccl19a.2 LOC106585882 coding downstream 365670 6710688 ~ 6713091 (+)
G468647 LOC106607872 non-coding upstream 10137 6302128 ~ 6333859 (+)
G468785 NA non-coding upstream 27629 6293208 ~ 6316367 (+)
G468770 NA non-coding upstream 82517 6257968 ~ 6261479 (+)
G468660 NA non-coding upstream 101215 6202078 ~ 6242781 (+)
G468791 NA non-coding downstream 4872 6350096 ~ 6379704 (+)
G468794 NA non-coding downstream 26919 6372143 ~ 6373052 (+)
G468795 NA non-coding downstream 37345 6382569 ~ 6386729 (+)
G468796 NA non-coding downstream 45759 6390983 ~ 6391254 (+)
G468636 NA non-coding downstream 57677 6402901 ~ 6447019 (+)
G468768 NA other upstream 381 6254476 ~ 6371873 (+)
G468755 NA other upstream 99495 6210199 ~ 6244501 (+)
G468643 LOC106607869 other upstream 144841 6194772 ~ 6199155 (+)
G468732 NA other upstream 187315 6108379 ~ 6156681 (+)
G466813 NA other upstream 2570656 3772864 ~ 3773340 (+)
G468765 LOC106607873 other downstream 78190 6423414 ~ 6488418 (+)
G468841 LOC106590901 other downstream 205753 6550977 ~ 6557058 (+)
G468887 sdf2l other downstream 327284 6672508 ~ 6674387 (+)

Expression


Co-expression Network