G468794


Basic Information

Item Value
gene id G468794
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6372143 ~ 6373052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532829
cattacaacaacctctaagatagagtgcatagccaCCCAGTACCTTTCCATCATCTGGTTTGATGTTTGTCCAGTTCCTTTTTCCATGTTAGTAGTGGTGACTTTGATTTCATTGCCAAAGTGTTCCTTTAACAACCTCTTAGACTCCGCGTTGCCTCTTCTGCCTTCTATATGCAGACAACTACAGACCAGATCCTTGGGCTGACCAGAGGTGTACTGTTCCAGGTAATAGAGCCTATCCTGGTGACTGCTGACCAGAGGTGTACTGTTCCAGGTAACAGAGCCTATCCCGGTGACTGCTGGTCTTCTCTTCTATGCCATGCTCAAATGCACGCATGAATGAAAACATAGGTATCTCCCTAACAGCGAGTGTAGCCTGTTTGTGCTGTAGTACAAGGAGGTCAGCAATTTCATTCTGCTTTTGCatgacagtagagaggttatcaTGGCTGGTATTATGGCTGATACTGTCGTAGAAAATCGGTTCAAATATGACACTTGCAAGAACTTGTGAAatcaatataggcttttaatacaacGGAAAGCAAGCCGGagtggtccgcggaacacacgCCTTTTTCAGAGCACTGGCTctgatttatacacatacaacatatgagtccatcccacatgcaaatgaagttacttccctcagtccatctgccaccattatatcccaatctgtgcatcctgcttgttcagctcgataacgcccatatctgctttcagtCAAGTTATAATGGTGACAGGACCTCTTCATGTCCCAAAAATAATACGTGCCtattgttacggtgagtgaatgaggacccaaaagcgaactaacttaaacagagcttctttaataaccaaacataggtaggc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106572570

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532829 True 861 lncRNA 0.44 2 6372143 6373052

Neighbor

gene id symbol gene type direction distance location
LOC110510500 LOC106607873 coding upstream 140743 6224254 ~ 6231849 (+)
LOC118964813 NA coding upstream 198732 6166943 ~ 6173411 (+)
LOC110510489 LOC106593421 coding upstream 224144 6060608 ~ 6147999 (+)
LOC118964812 LOC106607869 coding upstream 283420 6078177 ~ 6088723 (+)
LOC110525066 LOC106585873 coding upstream 335590 5998826 ~ 6036553 (+)
LOC110518225 LOC106607873 coding downstream 50089 6423141 ~ 6428139 (+)
LOC118964815 LOC106607873 coding downstream 108960 6482012 ~ 6488606 (+)
LOC110525188 NA coding downstream 235869 6608921 ~ 6609844 (+)
ydjc ydjc coding downstream 309855 6682907 ~ 6692547 (+)
ccl19a.2 LOC106585882 coding downstream 337842 6710688 ~ 6713091 (+)
G468768 NA non-coding upstream 270 6254476 ~ 6371873 (+)
G468769 NA non-coding upstream 3692 6338339 ~ 6368451 (+)
G468789 NA non-coding upstream 6253 6336953 ~ 6365890 (+)
G468653 NA non-coding upstream 8804 6251178 ~ 6363339 (+)
G468662 NA non-coding upstream 26919 6343996 ~ 6345224 (+)
G468795 NA non-coding downstream 9517 6382569 ~ 6386729 (+)
G468796 NA non-coding downstream 17931 6390983 ~ 6391254 (+)
G468636 NA non-coding downstream 29849 6402901 ~ 6447019 (+)
G468641 NA non-coding downstream 35342 6408394 ~ 6466268 (+)
G468765 LOC106607873 non-coding downstream 55245 6423414 ~ 6488418 (+)
G468755 NA other upstream 127642 6210199 ~ 6244501 (+)
G468643 LOC106607869 other upstream 172988 6194772 ~ 6199155 (+)
G468732 NA other upstream 215462 6108379 ~ 6156681 (+)
G466813 NA other upstream 2598803 3772864 ~ 3773340 (+)
G468791 NA other downstream 4587 6350096 ~ 6379704 (+)
G468841 LOC106590901 other downstream 177925 6550977 ~ 6557058 (+)
G468887 sdf2l other downstream 299456 6672508 ~ 6674387 (+)

Expression


Co-expression Network