G468636


Basic Information

Item Value
gene id G468636
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6402901 ~ 6447019 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532616
ACAGGACAATATTGATATCTCACTAAGTGAAGGATGGACCACTATAGACTAGAAACAGTAGGAGACAATCTTACCCAGTTCAGCATTTTCATTGTTGACATCCTCCacctgtttgtctctctcctttaactgcttctctctctcctctagtagGTTGTCTTTCTCTTCtacttcctgtctcctctcttctacttcctgtctcctctcttctacttcctgtctcctctcttttaGTTCATTTTCATTGTTGACATCCTCCaccctgtttgtctctctcctttaactggttctctctctcctctagtagGTTGTCTTTCTCTTCtacttcctgtctcctctcttctacttcctgtctcctctcttttaGTTCATTTTTCTTTTCCCTCcagtagtttctctctctctttcagtagtctgtccttctctcccagtCTGTGGTTCCTGTCCTCTAGTTGAATGTCTCTATCCTTTAGTTGTTTGACTCTCTCTTCCAGtagtctgtccttctctcccagtCTGTGGTTCCTGTCCTCTAGTTGAAGGTCTTTTTCCTGCAGTAGGACTCTGAAGTTCTCTACTTGGCTGTTCTTGTCCTGCAGGTTCTTTCTCAGAGCCTCTAGTTGAATGTCTCTATCCTTTAGTTGCTTGTCTTTCTCTTCCAGTTGGTTTTCTTTCTCTTCTAATAGTTTCTCCCTCTGTTCCATTATCTGGTTCTTCTCCTCCaggagtctctctttctctctcacttcctggGTCATATCATCCagttgtgtgtctttctctctcacttcctggGTCATATCATCCagttgtctgtctttctctctcacttcctggGTCATATCATCCAGTTGTGTGTCTTTCTCCTTTAGTTGTTTCATCATCTCCTGTCTTAATTTCTCTTTTAATTCTTTTTCCATCTTC

Function

NR:

description
trichohyalin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532616 True 924 lncRNA 0.43 2 6402901 6447019

Neighbor

gene id symbol gene type direction distance location
LOC110510500 LOC106607873 coding upstream 171501 6224254 ~ 6231849 (+)
LOC118964813 NA coding upstream 229490 6166943 ~ 6173411 (+)
LOC110510489 LOC106593421 coding upstream 254902 6060608 ~ 6147999 (+)
LOC118964812 LOC106607869 coding upstream 314178 6078177 ~ 6088723 (+)
LOC110525066 LOC106585873 coding upstream 366348 5998826 ~ 6036553 (+)
LOC118964815 LOC106607873 coding downstream 34993 6482012 ~ 6488606 (+)
LOC110525188 NA coding downstream 161902 6608921 ~ 6609844 (+)
ydjc ydjc coding downstream 235888 6682907 ~ 6692547 (+)
ccl19a.2 LOC106585882 coding downstream 263875 6710688 ~ 6713091 (+)
ccl19a.1 LOC106585878 coding downstream 272861 6719880 ~ 6741493 (+)
G468649 NA non-coding upstream 84 6323223 ~ 6402817 (+)
G468796 NA non-coding upstream 11647 6390983 ~ 6391254 (+)
G468795 NA non-coding upstream 16172 6382569 ~ 6386729 (+)
G468791 NA non-coding upstream 23197 6350096 ~ 6379704 (+)
G468794 NA non-coding upstream 29849 6372143 ~ 6373052 (+)
G468820 NA non-coding downstream 47919 6494938 ~ 6495684 (+)
G468639 NA non-coding downstream 54899 6501918 ~ 6504478 (+)
G468822 NA non-coding downstream 60883 6507902 ~ 6523525 (+)
G468841 LOC106590901 non-coding downstream 103958 6550977 ~ 6557058 (+)
G468855 top3b non-coding downstream 146005 6593024 ~ 6593649 (+)
G468768 NA other upstream 59286 6254476 ~ 6371873 (+)
G468755 NA other upstream 158400 6210199 ~ 6244501 (+)
G468643 LOC106607869 other upstream 203746 6194772 ~ 6199155 (+)
G468732 NA other upstream 246220 6108379 ~ 6156681 (+)
G468887 sdf2l other downstream 225489 6672508 ~ 6674387 (+)
G469048 NA other downstream 905167 7352186 ~ 7352578 (+)

Expression


Co-expression Network