G468641


Basic Information

Item Value
gene id G468641
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6408394 ~ 6466268 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532621
TCTGTACAGGGAAAGAGActggttgttattgttgttgtttaggtGTTTAGAAACATTACTGGAGTTCTAGAACACTTACCTTCTCTGACCAATAAACTCACTGCAGCCTCATCCTTCTGTTCTCCATGGATGACCTGACAGATGTAGACTCCTATATCTGACCACCTGAAGTCTCTCAGCCTCAGAGACACGTTGCCTCTCTTCAGCTTCTGGGTGATCAGACTCACTCTGCCCTCATAGCCACTCCTCTCTGTCACCTGGCCATTCTTATACATGTAAATACACTCTGTCCCTTTAAACCACCTGATCGTAGTGGCAACAGCACTGGTGTCAGGTGTCAGCACTGGTGTCAGGTGACTGGTGTCAGGTGAGATGTGACAGGGGAGGGTGACCTCTTCACCAACTTTAACCTCCACATGGTCTTCTGAGGTGAGTTTAAACTGATCTGTTCAGAAAGAGAGAACATTTCATG

Function

NR:

description
butyrophilin subfamily 1 member A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532621 True 472 lncRNA 0.47 2 6408394 6466268

Neighbor

gene id symbol gene type direction distance location
LOC110510500 LOC106607873 coding upstream 176994 6224254 ~ 6231849 (+)
LOC118964813 NA coding upstream 234983 6166943 ~ 6173411 (+)
LOC110510489 LOC106593421 coding upstream 260395 6060608 ~ 6147999 (+)
LOC118964812 LOC106607869 coding upstream 319671 6078177 ~ 6088723 (+)
LOC110525066 LOC106585873 coding upstream 371841 5998826 ~ 6036553 (+)
LOC118964815 LOC106607873 coding downstream 15744 6482012 ~ 6488606 (+)
LOC110525188 NA coding downstream 142653 6608921 ~ 6609844 (+)
ydjc ydjc coding downstream 216639 6682907 ~ 6692547 (+)
ccl19a.2 LOC106585882 coding downstream 244626 6710688 ~ 6713091 (+)
ccl19a.1 LOC106585878 coding downstream 253612 6719880 ~ 6741493 (+)
G468649 NA non-coding upstream 5577 6323223 ~ 6402817 (+)
G468796 NA non-coding upstream 17140 6390983 ~ 6391254 (+)
G468795 NA non-coding upstream 21665 6382569 ~ 6386729 (+)
G468791 NA non-coding upstream 28690 6350096 ~ 6379704 (+)
G468794 NA non-coding upstream 35342 6372143 ~ 6373052 (+)
G468820 NA non-coding downstream 28670 6494938 ~ 6495684 (+)
G468639 NA non-coding downstream 35650 6501918 ~ 6504478 (+)
G468822 NA non-coding downstream 41634 6507902 ~ 6523525 (+)
G468841 LOC106590901 non-coding downstream 84709 6550977 ~ 6557058 (+)
G468855 top3b non-coding downstream 126756 6593024 ~ 6593649 (+)
G468768 NA other upstream 64779 6254476 ~ 6371873 (+)
G468755 NA other upstream 163893 6210199 ~ 6244501 (+)
G468643 LOC106607869 other upstream 209239 6194772 ~ 6199155 (+)
G468732 NA other upstream 251713 6108379 ~ 6156681 (+)
G468887 sdf2l other downstream 206240 6672508 ~ 6674387 (+)
G469048 NA other downstream 885918 7352186 ~ 7352578 (+)

Expression


Co-expression Network