G468820


Basic Information

Item Value
gene id G468820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6494938 ~ 6495684 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532868
AGGTAACACCTATACTAATTCCTTGTGACCCCAGTTCATTTTAGGTTAGGTAACACCTATACTAATTCCTTGTGACCCCAGTTCATTTTAGGTTAGGTAACACCTATACTAATTCCTCGTGACCCCAGTTCATTTTAGGTTAGGTAACACCTATACTAATTCCTTGTGACCCCAGTTCATTTTAGGTTAGGTAACACCTATACTAATTCCTTGTGACCCCTCCACCCTTCCATTCCAGAATCCTATTCCAGATTAAGACAACATAAAATCTACATTTATTTCCAAATAAAACCACATAAAATGTCTCATGATTTAAACCCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532868 True 324 lncRNA 0.38 3 6494938 6495684

Neighbor

gene id symbol gene type direction distance location
LOC118964815 LOC106607873 coding upstream 6332 6482012 ~ 6488606 (+)
LOC110518225 LOC106607873 coding upstream 66799 6423141 ~ 6428139 (+)
LOC110510500 LOC106607873 coding upstream 263538 6224254 ~ 6231849 (+)
LOC118964813 NA coding upstream 321527 6166943 ~ 6173411 (+)
LOC110510489 LOC106593421 coding upstream 346939 6060608 ~ 6147999 (+)
LOC110525188 NA coding downstream 113237 6608921 ~ 6609844 (+)
ydjc ydjc coding downstream 187223 6682907 ~ 6692547 (+)
ccl19a.2 LOC106585882 coding downstream 215210 6710688 ~ 6713091 (+)
ccl19a.1 LOC106585878 coding downstream 224196 6719880 ~ 6741493 (+)
LOC110525076 LOC106570860 coding downstream 255297 6750981 ~ 6771402 (+)
G468765 LOC106607873 non-coding upstream 6520 6423414 ~ 6488418 (+)
G468641 NA non-coding upstream 28670 6408394 ~ 6466268 (+)
G468636 NA non-coding upstream 47919 6402901 ~ 6447019 (+)
G468802 NA non-coding upstream 63149 6430148 ~ 6431789 (+)
G468649 NA non-coding upstream 92121 6323223 ~ 6402817 (+)
G468639 NA non-coding downstream 6234 6501918 ~ 6504478 (+)
G468822 NA non-coding downstream 12218 6507902 ~ 6523525 (+)
G468841 LOC106590901 non-coding downstream 55293 6550977 ~ 6557058 (+)
G468855 top3b non-coding downstream 97340 6593024 ~ 6593649 (+)
G468875 NA non-coding downstream 153000 6648684 ~ 6649239 (+)
G468791 NA other upstream 115669 6350096 ~ 6379704 (+)
G468768 NA other upstream 151323 6254476 ~ 6371873 (+)
G468755 NA other upstream 250437 6210199 ~ 6244501 (+)
G468643 LOC106607869 other upstream 295783 6194772 ~ 6199155 (+)
G468887 sdf2l other downstream 176824 6672508 ~ 6674387 (+)
G469048 NA other downstream 856502 7352186 ~ 7352578 (+)

Expression


Co-expression Network