G468822


Basic Information

Item Value
gene id G468822
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6507902 ~ 6523525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532872
cagatatatagtgggaggactatgtgaattattgacctctatagcagatatatagtgggaggactatgtgaaatattgacctctatagcagatatatagtgggaggactatgtgaaatattgacctctatggcagatatatagtgggaggactatgtgaaatattgacctctatggcagatatatagtgggaggaCTATGATATGAAAATTCTGGATAATTTGAAGAACATCTATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532872 True 238 lncRNA 0.36 2 6507902 6523525

Neighbor

gene id symbol gene type direction distance location
LOC118964815 LOC106607873 coding upstream 19296 6482012 ~ 6488606 (+)
LOC110518225 LOC106607873 coding upstream 79763 6423141 ~ 6428139 (+)
LOC110510500 LOC106607873 coding upstream 276502 6224254 ~ 6231849 (+)
LOC118964813 NA coding upstream 334491 6166943 ~ 6173411 (+)
LOC118964812 LOC106607869 coding upstream 419179 6078177 ~ 6088723 (+)
LOC110525188 NA coding downstream 85396 6608921 ~ 6609844 (+)
ydjc ydjc coding downstream 159382 6682907 ~ 6692547 (+)
ccl19a.2 LOC106585882 coding downstream 187369 6710688 ~ 6713091 (+)
ccl19a.1 LOC106585878 coding downstream 196355 6719880 ~ 6741493 (+)
LOC110525076 LOC106570860 coding downstream 227456 6750981 ~ 6771402 (+)
G468639 NA non-coding upstream 3424 6501918 ~ 6504478 (+)
G468820 NA non-coding upstream 12218 6494938 ~ 6495684 (+)
G468765 LOC106607873 non-coding upstream 19484 6423414 ~ 6488418 (+)
G468641 NA non-coding upstream 41634 6408394 ~ 6466268 (+)
G468636 NA non-coding upstream 60883 6402901 ~ 6447019 (+)
G468841 LOC106590901 non-coding downstream 27452 6550977 ~ 6557058 (+)
G468855 top3b non-coding downstream 69499 6593024 ~ 6593649 (+)
G468875 NA non-coding downstream 125159 6648684 ~ 6649239 (+)
G468878 NA non-coding downstream 134884 6658409 ~ 6708164 (+)
G468883 NA non-coding downstream 141576 6665101 ~ 6665789 (+)
G468791 NA other upstream 128633 6350096 ~ 6379704 (+)
G468768 NA other upstream 164287 6254476 ~ 6371873 (+)
G468755 NA other upstream 263401 6210199 ~ 6244501 (+)
G468643 LOC106607869 other upstream 308747 6194772 ~ 6199155 (+)
G468887 sdf2l other downstream 148983 6672508 ~ 6674387 (+)
G469048 NA other downstream 828661 7352186 ~ 7352578 (+)

Expression


Co-expression Network