G468875


Basic Information

Item Value
gene id G468875
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6648684 ~ 6649239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532959
TGCAGGCCTTCCTTCTCCCTGGGCCTGTAGCCTAATACTGCAGGCGTTCTGGCCCCTGCTCGGAGTTGGCATATCGAAACCCAATCCACAAACACACCATTAGGACACGTAAGTTTAAAGTGCCGTTAATAACATATTAATGTGCTCAATGTGCTCCATAATGCCATgaggctacaccccataatgatgtAAAGCTACACTCCATAATGCCATGAGGCTACACTCCATAATGCCATGAGGCTACACTCCATAATGCCGTGAGGCTACACTCCATAATGCCATGAGGCTACACTCCATAATGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532959 True 303 lncRNA 0.48 2 6648684 6649239

Neighbor

gene id symbol gene type direction distance location
LOC110525188 NA coding upstream 38840 6608921 ~ 6609844 (+)
LOC118964815 LOC106607873 coding upstream 160078 6482012 ~ 6488606 (+)
LOC110518225 LOC106607873 coding upstream 220545 6423141 ~ 6428139 (+)
LOC110510500 LOC106607873 coding upstream 417284 6224254 ~ 6231849 (+)
LOC118964813 NA coding upstream 475273 6166943 ~ 6173411 (+)
ydjc ydjc coding downstream 33668 6682907 ~ 6692547 (+)
ccl19a.2 LOC106585882 coding downstream 61655 6710688 ~ 6713091 (+)
ccl19a.1 LOC106585878 coding downstream 70641 6719880 ~ 6741493 (+)
LOC110525076 LOC106570860 coding downstream 101742 6750981 ~ 6771402 (+)
trnae-uuc NA coding downstream 102489 6751728 ~ 6751803 (+)
G468855 top3b non-coding upstream 55035 6593024 ~ 6593649 (+)
G468841 LOC106590901 non-coding upstream 91626 6550977 ~ 6557058 (+)
G468822 NA non-coding upstream 125159 6507902 ~ 6523525 (+)
G468639 NA non-coding upstream 144206 6501918 ~ 6504478 (+)
G468820 NA non-coding upstream 153000 6494938 ~ 6495684 (+)
G468878 NA non-coding downstream 9170 6658409 ~ 6708164 (+)
G468883 NA non-coding downstream 15862 6665101 ~ 6665789 (+)
G468885 NA non-coding downstream 20211 6669450 ~ 6738008 (+)
G468897 NA non-coding downstream 48133 6697372 ~ 6702759 (+)
G468920 NA non-coding downstream 86458 6735697 ~ 6756156 (+)
G468765 LOC106607873 other upstream 160266 6423414 ~ 6488418 (+)
G468791 NA other upstream 269415 6350096 ~ 6379704 (+)
G468768 NA other upstream 305069 6254476 ~ 6371873 (+)
G468755 NA other upstream 404183 6210199 ~ 6244501 (+)
G468887 sdf2l other downstream 23269 6672508 ~ 6674387 (+)
G469048 NA other downstream 702947 7352186 ~ 7352578 (+)
LOC110525210 LOC106585898 other downstream 959078 7608126 ~ 7652997 (+)

Expression


Co-expression Network