G468883


Basic Information

Item Value
gene id G468883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6665101 ~ 6665789 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532972
ATATTTAGAGTTAGAGATCTAGTTCatgtgttttgagtttccacttcCTCAGGTGTCGAACTCCAAATGAATTAGCCTGTGATATTAGTTAGTGCACATAAAGAAGAATGTAATTCATCTCTATTGGAGAAAAACTATTGTGGAGGCATGGTGCCACTGTAGCAGACAGTGACAGAAAATGTTACTCTGGAGCCCTGTGATAGTAATGAACACTTAGGGTAGGTGACGATTCAGGGGAACATGTTAGTCTAGAGCCCTGTGATAGTAATGAACACTTAGGGTAGGTGATGATTCAGGGGAACATATTAGTCTAGAGCCCTGTGATAGTAATGAACACTTAGGGTAGGTGATGATTCAGGGGAACATATTAGTCTAGAGCCCTGTGATAGTAATGAACACTTAGGGTAGGTGATGATTCAGGGGAACATGTTAGTCTGAAGCCCTGGAATAGTAATAAACACTTAGGGTAGGTGATGATTCAGGGGAACATGTTAGTCTAGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532972 True 503 lncRNA 0.41 2 6665101 6665789

Neighbor

gene id symbol gene type direction distance location
LOC110525188 NA coding upstream 55257 6608921 ~ 6609844 (+)
LOC118964815 LOC106607873 coding upstream 176495 6482012 ~ 6488606 (+)
LOC110518225 LOC106607873 coding upstream 236962 6423141 ~ 6428139 (+)
LOC110510500 LOC106607873 coding upstream 433701 6224254 ~ 6231849 (+)
LOC118964813 NA coding upstream 491690 6166943 ~ 6173411 (+)
ydjc ydjc coding downstream 17118 6682907 ~ 6692547 (+)
ccl19a.2 LOC106585882 coding downstream 45105 6710688 ~ 6713091 (+)
ccl19a.1 LOC106585878 coding downstream 54091 6719880 ~ 6741493 (+)
LOC110525076 LOC106570860 coding downstream 85192 6750981 ~ 6771402 (+)
trnae-uuc NA coding downstream 85939 6751728 ~ 6751803 (+)
G468875 NA non-coding upstream 15862 6648684 ~ 6649239 (+)
G468855 top3b non-coding upstream 71452 6593024 ~ 6593649 (+)
G468841 LOC106590901 non-coding upstream 108043 6550977 ~ 6557058 (+)
G468822 NA non-coding upstream 141576 6507902 ~ 6523525 (+)
G468639 NA non-coding upstream 160623 6501918 ~ 6504478 (+)
G468885 NA non-coding downstream 3661 6669450 ~ 6738008 (+)
G468897 NA non-coding downstream 31583 6697372 ~ 6702759 (+)
G468920 NA non-coding downstream 69908 6735697 ~ 6756156 (+)
G468929 NA non-coding downstream 106761 6772550 ~ 6772965 (+)
G468930 NA non-coding downstream 109245 6775034 ~ 6781668 (+)
G468765 LOC106607873 other upstream 176683 6423414 ~ 6488418 (+)
G468791 NA other upstream 285832 6350096 ~ 6379704 (+)
G468768 NA other upstream 321486 6254476 ~ 6371873 (+)
G468755 NA other upstream 420600 6210199 ~ 6244501 (+)
G468887 sdf2l other downstream 6719 6672508 ~ 6674387 (+)
G469048 NA other downstream 686397 7352186 ~ 7352578 (+)
LOC110525210 LOC106585898 other downstream 942528 7608126 ~ 7652997 (+)

Expression


Co-expression Network