G468885


Basic Information

Item Value
gene id G468885
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6669450 ~ 6738008 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU532975
ctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactataaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtactcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctaatacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcggcacacgtgacaaataaactttgatttgatttgacatagatTGCAGTATAGagtagccgtcttcatcgacctggccaaggctttcgactctgtcaatcaccgcattcttatcggcagactaaacagccttgatttctcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532975 True 503 lncRNA 0.40 2 6669450 6738008

Neighbor

gene id symbol gene type direction distance location
LOC110525188 NA coding upstream 59606 6608921 ~ 6609844 (+)
LOC118964815 LOC106607873 coding upstream 180844 6482012 ~ 6488606 (+)
LOC110518225 LOC106607873 coding upstream 241311 6423141 ~ 6428139 (+)
LOC110510500 LOC106607873 coding upstream 438050 6224254 ~ 6231849 (+)
LOC118964813 NA coding upstream 496039 6166943 ~ 6173411 (+)
LOC110525076 LOC106570860 coding downstream 12973 6750981 ~ 6771402 (+)
trnae-uuc NA coding downstream 13720 6751728 ~ 6751803 (+)
LOC118964793 LOC106597030 coding downstream 150841 6888849 ~ 6895793 (+)
LOC110525195 NA coding downstream 169600 6907344 ~ 6929358 (+)
LOC118964818 LOC106597030 coding downstream 173812 6911820 ~ 6914445 (+)
G468883 NA non-coding upstream 3661 6665101 ~ 6665789 (+)
G468875 NA non-coding upstream 20211 6648684 ~ 6649239 (+)
G468855 top3b non-coding upstream 75801 6593024 ~ 6593649 (+)
G468841 LOC106590901 non-coding upstream 112392 6550977 ~ 6557058 (+)
G468822 NA non-coding upstream 145925 6507902 ~ 6523525 (+)
G468929 NA non-coding downstream 34542 6772550 ~ 6772965 (+)
G468930 NA non-coding downstream 37026 6775034 ~ 6781668 (+)
G468907 NA non-coding downstream 56407 6794415 ~ 6795906 (+)
G468938 LOC106585891 non-coding downstream 62172 6800180 ~ 6800514 (+)
G468939 NA non-coding downstream 62839 6800847 ~ 6801926 (+)
G468765 LOC106607873 other upstream 181032 6423414 ~ 6488418 (+)
G468791 NA other upstream 290181 6350096 ~ 6379704 (+)
G468768 NA other upstream 325835 6254476 ~ 6371873 (+)
G468755 NA other upstream 424949 6210199 ~ 6244501 (+)
G469048 NA other downstream 614178 7352186 ~ 7352578 (+)
LOC110525210 LOC106585898 other downstream 870309 7608126 ~ 7652997 (+)
G470292 NA other downstream 1475272 8213280 ~ 8217274 (+)
G470599 NA other downstream 2071965 8809973 ~ 8810943 (+)
G470770 NA other downstream 2485343 9223351 ~ 9225513 (+)

Expression


Co-expression Network