G468920


Basic Information

Item Value
gene id G468920
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6735697 ~ 6756156 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU533028
ATAATAATGATGCACAAAAAGTGGTTGTTTTCCATATTATTTGATCgagaaatacatttaatttgaggTAGATGTCTTGTGTCTTTGCCCATAACTTTACACCTTTTAGATGTAACTGTttgaggacagggttttgttctgtctggattccattagaatgacatcacagagaaatagacagggttgtgttctttctggattccattagaatgacatcacagagaaagggacagggttttgttctttctggattccattagaatgacaatagcagagaaagggacagggttgtgttctttctggattccattagaatgacatcacagagaaagggacagggttgtgttctttctggattccattagaatgacatcacagagaaagggacagggttgtgttctttctggattccattagaatgacatcacagagaaaggaacagggttgtgttctttctggattccattagaatgacatcacagagaaagggacagggttgtgttctttctggattccattagaatgacatcacagagaaagggacagggttgtgttctttctggattccattagaatgacatcacagagaaagggacagggttgtgttctttctggattccattagaatgacatcacagagaaagggacagggttgtattctttctggattccattagaatgacatcacagagaaagggacagggttgtgttctttctggattccattagaatgacatcacagagaaagggagagggttgtgttctttctggattccattagaatgacatcacagagaaagagacaggagcagcataggcaagatacagtagatggtatcgagtacagtatatacatatgagatgagtatgtaaacaaagtggcatagttaaagtggctagtgatacatgtattacataaagatgcagtagatgatatagagtacagtatatacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU533028 True 954 lncRNA 0.39 2 6735697 6756156

Neighbor

gene id symbol gene type direction distance location
ccl19a.2 LOC106585882 coding upstream 22606 6710688 ~ 6713091 (+)
ydjc ydjc coding upstream 43150 6682907 ~ 6692547 (+)
LOC110525188 NA coding upstream 125853 6608921 ~ 6609844 (+)
LOC118964815 LOC106607873 coding upstream 247091 6482012 ~ 6488606 (+)
LOC110518225 LOC106607873 coding upstream 307558 6423141 ~ 6428139 (+)
LOC118964793 LOC106597030 coding downstream 132693 6888849 ~ 6895793 (+)
LOC110525195 NA coding downstream 151452 6907344 ~ 6929358 (+)
LOC118964818 LOC106597030 coding downstream 155664 6911820 ~ 6914445 (+)
LOC118964819 LOC106597030 coding downstream 177458 6933614 ~ 6935571 (+)
LOC118964794 LOC106600203 coding downstream 191860 6948016 ~ 6950249 (+)
G468878 NA non-coding upstream 27533 6658409 ~ 6708164 (+)
G468897 NA non-coding upstream 32938 6697372 ~ 6702759 (+)
G468883 NA non-coding upstream 69908 6665101 ~ 6665789 (+)
G468875 NA non-coding upstream 86458 6648684 ~ 6649239 (+)
G468855 top3b non-coding upstream 142048 6593024 ~ 6593649 (+)
G468929 NA non-coding downstream 16394 6772550 ~ 6772965 (+)
G468930 NA non-coding downstream 18878 6775034 ~ 6781668 (+)
G468907 NA non-coding downstream 38259 6794415 ~ 6795906 (+)
G468938 LOC106585891 non-coding downstream 44024 6800180 ~ 6800514 (+)
G468939 NA non-coding downstream 44691 6800847 ~ 6801926 (+)
G468887 sdf2l other upstream 61310 6672508 ~ 6674387 (+)
G468841 LOC106590901 other upstream 182602 6550977 ~ 6557058 (+)
G468765 LOC106607873 other upstream 247279 6423414 ~ 6488418 (+)
G468791 NA other upstream 356428 6350096 ~ 6379704 (+)
G469048 NA other downstream 596030 7352186 ~ 7352578 (+)
LOC110525210 LOC106585898 other downstream 852161 7608126 ~ 7652997 (+)
G470292 NA other downstream 1457124 8213280 ~ 8217274 (+)
G470599 NA other downstream 2053817 8809973 ~ 8810943 (+)
G470770 NA other downstream 2467195 9223351 ~ 9225513 (+)

Expression


Co-expression Network