G468953


Basic Information

Item Value
gene id G468953
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6821895 ~ 6822150 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU533072
GgcgtgagttacttgatgtggaatagagttccatgtagtcatgtctctatgtagtactgtggaatagagttgcatgtagtcatggctctatgtagtactgtgtgacATTATGTCCTTATTTTATACTGTTTGACATTATGTCCTTATTTTATACTGTTTGACATTATGTCCTTATTTTATACTGTATAAAATGTCCTTATTTTCCACTTCTTATTATCATCCTCTTTCAACCCctttctctcgtcctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU533072 True 256 lncRNA 0.36 1 6821895 6822150

Neighbor

gene id symbol gene type direction distance location
LOC110525076 LOC106570860 coding upstream 50493 6750981 ~ 6771402 (+)
trnae-uuc NA coding upstream 70092 6751728 ~ 6751803 (+)
ccl19a.1 LOC106585878 coding upstream 80402 6719880 ~ 6741493 (+)
ccl19a.2 LOC106585882 coding upstream 108804 6710688 ~ 6713091 (+)
ydjc ydjc coding upstream 129348 6682907 ~ 6692547 (+)
LOC118964793 LOC106597030 coding downstream 66699 6888849 ~ 6895793 (+)
LOC110525195 NA coding downstream 85458 6907344 ~ 6929358 (+)
LOC118964818 LOC106597030 coding downstream 89670 6911820 ~ 6914445 (+)
LOC118964819 LOC106597030 coding downstream 111464 6933614 ~ 6935571 (+)
LOC118964794 LOC106600203 coding downstream 125866 6948016 ~ 6950249 (+)
G468952 NA non-coding upstream 1832 6819498 ~ 6820063 (+)
G468950 LOC106585891 non-coding upstream 4566 6816466 ~ 6817329 (+)
G468949 NA non-coding upstream 5955 6815363 ~ 6815940 (+)
G468948 NA non-coding upstream 7780 6813398 ~ 6814115 (+)
G468945 NA non-coding upstream 11609 6809826 ~ 6810286 (+)
G468966 NA non-coding downstream 34716 6856866 ~ 6864502 (+)
G468975 NA non-coding downstream 59791 6881941 ~ 6883507 (+)
G468980 NA non-coding downstream 70045 6892195 ~ 6917348 (+)
G468971 NA non-coding downstream 71848 6893998 ~ 6953564 (+)
G468887 sdf2l other upstream 147508 6672508 ~ 6674387 (+)
G468841 LOC106590901 other upstream 268800 6550977 ~ 6557058 (+)
G468765 LOC106607873 other upstream 333477 6423414 ~ 6488418 (+)
G469048 NA other downstream 530036 7352186 ~ 7352578 (+)
LOC110525210 LOC106585898 other downstream 786167 7608126 ~ 7652997 (+)
G470292 NA other downstream 1391130 8213280 ~ 8217274 (+)
G470599 NA other downstream 1987823 8809973 ~ 8810943 (+)
G470770 NA other downstream 2401201 9223351 ~ 9225513 (+)

Expression


Co-expression Network