G468995



Basic Information


Item Value
gene id G468995
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6924446 ~ 6958179 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU533139
ggtttacacttgtacttttacttttgatacttaagtacatttaaaaccaaatactttaagacttttactcaagtagtatttcactggggGACTCTCACTTTTacttgtcattttctattaaggtatctttacttttactcaagtatgactattgagtacttttagacttttactcaagtagtatttcactgggtgactcTCACTTTTacttgtcattttctatt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU533139 True 224 lncRNA 0.30 2 6924446 6958179

Neighbor


gene id symbol gene type direction distance location
LOC118964818 LOC106597030 coding upstream 10001 6911820 ~ 6914445 (+)
LOC110525195 NA coding upstream 14490 6907344 ~ 6929358 (+)
LOC118964793 LOC106597030 coding upstream 28653 6888849 ~ 6895793 (+)
LOC110525076 LOC106570860 coding upstream 153044 6750981 ~ 6771402 (+)
LOC110525083 LOC106600203 coding downstream 7532 6965711 ~ 6972578 (+)
LOC118964823 LOC106600203 coding downstream 36309 6994488 ~ 6996771 (+)
LOC118964821 LOC106600203 coding downstream 64821 7023000 ~ 7025283 (+)
LOC118964824 LOC106597030 coding downstream 93251 7051430 ~ 7053712 (+)
LOC118964820 LOC106600203 coding downstream 109676 7067855 ~ 7070138 (+)
G468980 NA non-coding upstream 7098 6892195 ~ 6917348 (+)
G468975 NA non-coding upstream 40939 6881941 ~ 6883507 (+)
G468966 NA non-coding upstream 59944 6856866 ~ 6864502 (+)
G468953 NA non-coding upstream 102296 6821895 ~ 6822150 (+)
G469006 NA non-coding downstream 116031 7074210 ~ 7080369 (+)
G469013 NA non-coding downstream 205529 7163708 ~ 7196900 (+)
LOC118964829 LOC106597030 non-coding downstream 232244 7153940 ~ 7248751 (+)
LOC118964833 LOC106600203 non-coding downstream 270042 7226101 ~ 7268528 (+)
G468991 NA non-coding downstream 302373 7260552 ~ 7262569 (+)
ccl19a.1 LOC106585878 other upstream 182953 6719880 ~ 6741493 (+)
ccl19a.2 LOC106585882 other upstream 211409 6710688 ~ 6713091 (+)
G468887 sdf2l other upstream 250059 6672508 ~ 6674387 (+)
G468841 LOC106590901 other upstream 371351 6550977 ~ 6557058 (+)
G468765 LOC106607873 other upstream 436028 6423414 ~ 6488418 (+)
G469048 NA other downstream 394007 7352186 ~ 7352578 (+)
LOC110525210 LOC106585898 other downstream 650138 7608126 ~ 7652997 (+)
G470292 NA other downstream 1255101 8213280 ~ 8217274 (+)
G470599 NA other downstream 1851794 8809973 ~ 8810943 (+)
G470770 NA other downstream 2265172 9223351 ~ 9225513 (+)

Expression



Co-expression Network