Gene
RNA
| Item | Value |
|---|---|
| gene id | G468990 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 6940787 ~ 7260499 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU533133 | False | 637 | lncRNA | 0.36 | 2 | 6940787 | 6959762 |
| TU533132 | True | 320 | lncRNA | 0.34 | 2 | 6959308 | 7260499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964819 | LOC106597030 | coding | upstream | 5216 | 6933614 ~ 6935571 (+) |
| LOC118964818 | LOC106597030 | coding | upstream | 26342 | 6911820 ~ 6914445 (+) |
| LOC110525195 | NA | coding | upstream | 30831 | 6907344 ~ 6929358 (+) |
| LOC118964793 | LOC106597030 | coding | upstream | 44994 | 6888849 ~ 6895793 (+) |
| LOC110525076 | LOC106570860 | coding | upstream | 169385 | 6750981 ~ 6771402 (+) |
| LOC110525200 | NA | coding | downstream | 6760 | 7267259 ~ 7268326 (+) |
| LOC118964834 | NA | coding | downstream | 21853 | 7282352 ~ 7283531 (+) |
| LOC118964835 | LOC106600203 | coding | downstream | 26697 | 7287196 ~ 7289594 (+) |
| LOC118964836 | LOC106600203 | coding | downstream | 41505 | 7302004 ~ 7304410 (+) |
| LOC118936656 | NA | coding | downstream | 58107 | 7318606 ~ 7319147 (+) |
| G468980 | NA | non-coding | upstream | 23439 | 6892195 ~ 6917348 (+) |
| G468975 | NA | non-coding | upstream | 57280 | 6881941 ~ 6883507 (+) |
| G468966 | NA | non-coding | upstream | 76285 | 6856866 ~ 6864502 (+) |
| G468991 | NA | non-coding | downstream | 53 | 7260552 ~ 7262569 (+) |
| G469047 | NA | non-coding | downstream | 90069 | 7350568 ~ 7350780 (+) |
| G469492 | NA | non-coding | downstream | 96667 | 7357166 ~ 7357463 (+) |
| G469498 | NA | non-coding | downstream | 106466 | 7366965 ~ 7367188 (+) |
| G469500 | NA | non-coding | downstream | 108527 | 7369026 ~ 7369331 (+) |
| ccl19a.1 | LOC106585878 | other | upstream | 199294 | 6719880 ~ 6741493 (+) |
| ccl19a.2 | LOC106585882 | other | upstream | 227750 | 6710688 ~ 6713091 (+) |
| G468887 | sdf2l | other | upstream | 266400 | 6672508 ~ 6674387 (+) |
| G468841 | LOC106590901 | other | upstream | 387692 | 6550977 ~ 6557058 (+) |
| G468765 | LOC106607873 | other | upstream | 452369 | 6423414 ~ 6488418 (+) |
| G469048 | NA | other | downstream | 91687 | 7352186 ~ 7352578 (+) |
| LOC110525210 | LOC106585898 | other | downstream | 347818 | 7608126 ~ 7652997 (+) |
| G470292 | NA | other | downstream | 952781 | 8213280 ~ 8217274 (+) |
| G470599 | NA | other | downstream | 1549474 | 8809973 ~ 8810943 (+) |
| G470770 | NA | other | downstream | 1962852 | 9223351 ~ 9225513 (+) |
