XLOC_024071



Basic Information


Item Value
gene id XLOC_024071
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 20959183 ~ 20959582 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00049232
ATCTCCGGGTTCCTGCAGTGTTGAGTGCGCAGAGGAGAAATGAACTGCAGAAGCGCTCATGACAGATGGCCAAGCGTTTTTATGCACACATCTAAAGCATAAGAACCCACatcataattaattatttactaaatatgtttttttttcctttcaaagTAAGCCAGCCAGTGTGAGAAACAGTTTCATAAAAATCTAATTCTCACTTGCATACTTACAAGCGCCcgtgtttgtcattttaaaatgagaCACTGTAGATTTTGGCCTTTTTAGCATcccatcatttttttatttttttcaatttaaagaaAACATGCCAAATACACtagtacatgtatatatatatatatttttgtcaatttaTCAACTTGTTTTTGTagattaaatacattttctaaaATTC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00049232 True 400 lncRNA 0.32 1 20959183 20959582

Neighbor


gene id symbol gene type direction distance location
XLOC_024070 NA coding upstream 88308 20853200 ~ 20870875 (+)
XLOC_024069 ergic2 coding upstream 232196 20715950 ~ 20726987 (+)
XLOC_024068 kxd1 coding upstream 257259 20694177 ~ 20701924 (+)
XLOC_024067 CR846093.2 coding upstream 355171 20603896 ~ 20604012 (+)
XLOC_024066 CR846093.3 coding upstream 366586 20592483 ~ 20592597 (+)
XLOC_024072 NA coding downstream 38097 20997679 ~ 20998615 (+)
XLOC_024073 chrm2b coding downstream 87274 21046856 ~ 21061911 (+)
XLOC_024074 NA coding downstream 132661 21092243 ~ 21092575 (+)
XLOC_024075 rad52 coding downstream 139093 21098675 ~ 21115213 (+)
XLOC_024076 erc1a coding downstream 217355 21176937 ~ 21253162 (+)
XLOC_023973 CR762411.1 misc upstream 5741074 15217824 ~ 15218109 (+)
XLOC_024061 NA non-coding upstream 849754 20103265 ~ 20109429 (+)
XLOC_024057 NA non-coding upstream 960957 19987068 ~ 19998226 (+)
XLOC_024079 NA non-coding downstream 365006 21324588 ~ 21344673 (+)
XLOC_024080 NA non-coding downstream 538705 21498287 ~ 21499896 (+)
XLOC_024092 CR759863.2 non-coding downstream 1530107 22489689 ~ 22491864 (+)

Expression



Co-expression Network