XLOC_024072


Basic Information

Item Value
gene id XLOC_024072
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 20997679 ~ 20998615 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049233
GCATGCTGTTCTTGCAACAGCATTTTTATtagcaaaTTATGAACTTTAAACAATCTCAAATGTGAAAACTTACAATTCTAGTCAAAAATGAAGGACATAACTGCAAAattagcatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcactgtgGAGCTTTAGTTAGAATTACAGCAAAAAGTAAAATCTGCAGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049233 True 274 lncRNA 0.39 2 20997679 20998615

Neighbor

gene id symbol gene type direction distance location
XLOC_024071 NA coding upstream 38097 20959183 ~ 20959582 (+)
XLOC_024070 NA coding upstream 126804 20853200 ~ 20870875 (+)
XLOC_024069 ergic2 coding upstream 270692 20715950 ~ 20726987 (+)
XLOC_024068 kxd1 coding upstream 295755 20694177 ~ 20701924 (+)
XLOC_024067 CR846093.2 coding upstream 393667 20603896 ~ 20604012 (+)
XLOC_024073 chrm2b coding downstream 48241 21046856 ~ 21061911 (+)
XLOC_024074 NA coding downstream 93628 21092243 ~ 21092575 (+)
XLOC_024075 rad52 coding downstream 100060 21098675 ~ 21115213 (+)
XLOC_024076 erc1a coding downstream 178322 21176937 ~ 21253162 (+)
XLOC_024077 CR384055.1 coding downstream 260614 21259229 ~ 21296202 (+)
XLOC_023973 CR762411.1 misc upstream 5779570 15217824 ~ 15218109 (+)
XLOC_024066 CR846093.3 non-coding upstream 405082 20592483 ~ 20592597 (+)
XLOC_024061 NA non-coding upstream 888250 20103265 ~ 20109429 (+)
XLOC_024079 NA non-coding downstream 325973 21324588 ~ 21344673 (+)
XLOC_024080 NA non-coding downstream 499672 21498287 ~ 21499896 (+)
XLOC_024092 CR759863.2 non-coding downstream 1491074 22489689 ~ 22491864 (+)
XLOC_024093 NA non-coding downstream 1493378 22491993 ~ 22497122 (+)

Expression


Co-expression Network