Gene
RNA
| Item | Value |
|---|---|
| gene id | G470245 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 8143401 ~ 8143627 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU534642 | True | 227 | lncRNA | 0.36 | 1 | 8143401 | 8143627 |
8,141,600
8,142,000
8,142,400
8,142,800
8,143,200
8,143,600
8,144,000
8,144,400
8,144,800
8,145,200
8,145,600
8,146,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525087 | LOC106585905 | coding | upstream | 188677 | 7913507 ~ 7954724 (+) |
| gak | gak | coding | upstream | 233434 | 7867713 ~ 7909967 (+) |
| LOC110525210 | LOC106585898 | coding | upstream | 490404 | 7608126 ~ 7652997 (+) |
| LOC110525208 | LOC106585897 | coding | upstream | 543350 | 7534540 ~ 7600051 (+) |
| LOC110525085 | LOC106585885 | coding | upstream | 620100 | 7423076 ~ 7523301 (+) |
| lifra | LOC106585909 | coding | downstream | 767725 | 8911352 ~ 8936882 (+) |
| spef2 | LOC106585910 | coding | downstream | 793455 | 8937082 ~ 8984264 (+) |
| slc1a3a | LOC106585918 | coding | downstream | 878816 | 9022443 ~ 9056766 (+) |
| nipbla | LOC105014587 | coding | downstream | 932570 | 9076197 ~ 9118856 (+) |
| LOC110525223 | ndc80 | coding | downstream | 975341 | 9118968 ~ 9135047 (+) |
| G470232 | NA | non-coding | upstream | 10236 | 8132928 ~ 8133165 (+) |
| G470162 | NA | non-coding | upstream | 61981 | 8081190 ~ 8081420 (+) |
| G469885 | NA | non-coding | upstream | 143516 | 7927680 ~ 7999885 (+) |
| G469889 | NA | non-coding | upstream | 210275 | 7932458 ~ 7933126 (+) |
| G469880 | NA | non-coding | upstream | 230997 | 7912078 ~ 7912404 (+) |
| G470248 | NA | non-coding | downstream | 110 | 8143737 ~ 8144552 (+) |
| G470250 | NA | non-coding | downstream | 1266 | 8144893 ~ 8145269 (+) |
| G470257 | NA | non-coding | downstream | 20478 | 8164105 ~ 8164453 (+) |
| G470259 | NA | non-coding | downstream | 25601 | 8169228 ~ 8169851 (+) |
| G470273 | NA | non-coding | downstream | 51133 | 8194760 ~ 8195193 (+) |
| G469048 | NA | other | upstream | 790823 | 7352186 ~ 7352578 (+) |
| ccl19a.1 | LOC106585878 | other | upstream | 1401908 | 6719880 ~ 6741493 (+) |
| ccl19a.2 | LOC106585882 | other | upstream | 1430364 | 6710688 ~ 6713091 (+) |
| G468887 | sdf2l | other | upstream | 1469014 | 6672508 ~ 6674387 (+) |
| G470292 | NA | other | downstream | 69653 | 8213280 ~ 8217274 (+) |
| G470599 | NA | other | downstream | 666346 | 8809973 ~ 8810943 (+) |
| G470770 | NA | other | downstream | 1079724 | 9223351 ~ 9225513 (+) |
| LOC110525088 | LOC106585913 | other | downstream | 1124751 | 9228570 ~ 9273994 (+) |
| G472364 | NA | other | downstream | 2136679 | 10280306 ~ 10281123 (+) |
