G470624


Basic Information

Item Value
gene id G470624
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 8874189 ~ 8874951 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU535041
attggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttgcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacatattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatcttcgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcctcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcttgtgactacactttttatgtatatctttaagaaatggctttcttcttgtcactcttccataaaggccagatttgtg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU535041 True 763 lncRNA 0.42 1 8874189 8874951

Neighbor

gene id symbol gene type direction distance location
LOC110525087 LOC106585905 coding upstream 919465 7913507 ~ 7954724 (+)
gak gak coding upstream 964222 7867713 ~ 7909967 (+)
LOC110525210 LOC106585898 coding upstream 1221192 7608126 ~ 7652997 (+)
LOC110525208 LOC106585897 coding upstream 1274138 7534540 ~ 7600051 (+)
LOC110525085 LOC106585885 coding upstream 1350888 7423076 ~ 7523301 (+)
lifra LOC106585909 coding downstream 36401 8911352 ~ 8936882 (+)
spef2 LOC106585910 coding downstream 62131 8937082 ~ 8984264 (+)
slc1a3a LOC106585918 coding downstream 147492 9022443 ~ 9056766 (+)
nipbla LOC105014587 coding downstream 201246 9076197 ~ 9118856 (+)
LOC110525223 ndc80 coding downstream 244017 9118968 ~ 9135047 (+)
G470629 NA non-coding upstream 13539 8860334 ~ 8860650 (+)
G470613 NA non-coding upstream 25767 8847608 ~ 8848422 (+)
G470601 NA non-coding upstream 60819 8813027 ~ 8813370 (+)
G470600 NA non-coding upstream 62156 8811634 ~ 8812033 (+)
G470596 NA non-coding upstream 68366 8805583 ~ 8805823 (+)
G470642 NA non-coding downstream 11128 8886079 ~ 8886285 (+)
G470643 NA non-coding downstream 11766 8886717 ~ 8887083 (+)
G470647 NA non-coding downstream 14892 8889843 ~ 8890308 (+)
G470649 NA non-coding downstream 16679 8891630 ~ 8891850 (+)
G470678 NA non-coding downstream 106377 8981328 ~ 8982399 (+)
G470599 NA other upstream 63246 8809973 ~ 8810943 (+)
G470292 NA other upstream 656915 8213280 ~ 8217274 (+)
G469048 NA other upstream 1521611 7352186 ~ 7352578 (+)
ccl19a.1 LOC106585878 other upstream 2132696 6719880 ~ 6741493 (+)
G470770 NA other downstream 348400 9223351 ~ 9225513 (+)
LOC110525088 LOC106585913 other downstream 393427 9228570 ~ 9273994 (+)
G472364 NA other downstream 1405355 10280306 ~ 10281123 (+)
G473070 NA other downstream 2403387 11278338 ~ 11279265 (+)
G474321 NA other downstream 3313337 12188288 ~ 12190572 (+)

Expression


Co-expression Network