G470680


Basic Information

Item Value
gene id G470680
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 8985589 ~ 8985810 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU535111
gtttacgccgaggaacttaactttccaccttctccacaacTGTCCCGTCGatttggataggggggtgttccctctgctgtttcctgaaatccacaatcatctcctttgttttgttgacgttgagtgagaggttattttcctgacaccacactccgagggccctcacttcctccctgtaggccgtctcgtcgttattggtaatcaagcctgccactgtagtgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU535111 True 222 lncRNA 0.50 1 8985589 8985810

Neighbor

gene id symbol gene type direction distance location
spef2 LOC106585910 coding upstream 1325 8937082 ~ 8984264 (+)
lifra LOC106585909 coding upstream 48707 8911352 ~ 8936882 (+)
LOC110525087 LOC106585905 coding upstream 1030865 7913507 ~ 7954724 (+)
gak gak coding upstream 1075622 7867713 ~ 7909967 (+)
LOC110525210 LOC106585898 coding upstream 1332592 7608126 ~ 7652997 (+)
slc1a3a LOC106585918 coding downstream 36633 9022443 ~ 9056766 (+)
nipbla LOC105014587 coding downstream 90387 9076197 ~ 9118856 (+)
LOC110525223 ndc80 coding downstream 133158 9118968 ~ 9135047 (+)
LOC110525222 ndc80 coding downstream 155702 9141512 ~ 9163818 (+)
LOC110525088 LOC106585913 coding downstream 242760 9228570 ~ 9273994 (+)
G470678 NA non-coding upstream 3190 8981328 ~ 8982399 (+)
G470649 NA non-coding upstream 93739 8891630 ~ 8891850 (+)
G470647 NA non-coding upstream 95281 8889843 ~ 8890308 (+)
G470643 NA non-coding upstream 98506 8886717 ~ 8887083 (+)
G470642 NA non-coding upstream 99304 8886079 ~ 8886285 (+)
G470705 NA non-coding downstream 63320 9049130 ~ 9050441 (+)
G470712 NA non-coding downstream 83136 9068946 ~ 9069244 (+)
G470721 NA non-coding downstream 128231 9114041 ~ 9114470 (+)
G470725 NA non-coding downstream 139324 9125134 ~ 9125570 (+)
G470737 NA non-coding downstream 183759 9169569 ~ 9169871 (+)
G470599 NA other upstream 174646 8809973 ~ 8810943 (+)
G470292 NA other upstream 768315 8213280 ~ 8217274 (+)
G469048 NA other upstream 1633011 7352186 ~ 7352578 (+)
ccl19a.1 LOC106585878 other upstream 2244096 6719880 ~ 6741493 (+)
G470770 NA other downstream 237541 9223351 ~ 9225513 (+)
G472364 NA other downstream 1294496 10280306 ~ 10281123 (+)
G473070 NA other downstream 2292528 11278338 ~ 11279265 (+)
G474321 NA other downstream 3202478 12188288 ~ 12190572 (+)

Expression


Co-expression Network