Gene
RNA
| Item | Value |
|---|---|
| gene id | G471231 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 9025604 ~ 9026132 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: excitatory amino acid transporter 1-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU535763 | True | 508 | lncRNA | 0.45 | 2 | 9025604 | 9026132 |
9,024,800
9,025,200
9,025,600
9,026,000
9,026,400
9,026,800
9,027,200
9,027,600
9,028,000
9,028,400
9,028,800
9,029,200
9,029,600
NC_048570.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lmbrd2a | LOC106585919 | coding | downstream | 22931 | 8988891 ~ 9002673 (-) |
| LOC110525229 | LOC106585907 | coding | downstream | 129210 | 8894363 ~ 8896394 (-) |
| LOC110525230 | bri3bp | coding | downstream | 140451 | 8877792 ~ 8885153 (-) |
| aacs | aacs | coding | downstream | 153898 | 8814066 ~ 8871706 (-) |
| si:dkey-215k6.1 | LOC106585869 | coding | downstream | 266044 | 8316999 ~ 8759560 (-) |
| rtgdnf | rtgdnf | coding | upstream | 168501 | 9194633 ~ 9196133 (-) |
| si:ch73-72b7.1 | LOC106585820 | coding | upstream | 618359 | 9644491 ~ 9957507 (-) |
| stpg2 | stpg2 | coding | upstream | 1262884 | 10289016 ~ 10360380 (-) |
| smad4 | smad4 | coding | upstream | 1343837 | 10369969 ~ 10381469 (-) |
| elac1 | elac1 | coding | upstream | 1355494 | 10381626 ~ 10384394 (-) |
| G471222 | NA | non-coding | downstream | 11662 | 9006925 ~ 9013942 (-) |
| G471217 | NA | non-coding | downstream | 32406 | 8992923 ~ 8993198 (-) |
| G471193 | NA | non-coding | downstream | 57876 | 8967069 ~ 8967728 (-) |
| G471124 | LOC106585909 | non-coding | downstream | 88570 | 8932822 ~ 8937034 (-) |
| G471156 | NA | non-coding | downstream | 118276 | 8902677 ~ 8907328 (-) |
| G471272 | NA | non-coding | upstream | 85809 | 9111941 ~ 9112982 (-) |
| G471260 | LOC106585916 | non-coding | upstream | 91811 | 9117943 ~ 9137606 (-) |
| G471284 | LOC106585914 | non-coding | upstream | 103504 | 9129636 ~ 9131545 (-) |
| G471287 | NA | non-coding | upstream | 108372 | 9134504 ~ 9164056 (-) |
| G471313 | NA | non-coding | upstream | 167704 | 9193836 ~ 9194606 (-) |
| G470834 | NA | other | downstream | 727183 | 8296569 ~ 8298421 (-) |
| G469751 | NA | other | downstream | 1370986 | 7652639 ~ 7654618 (-) |
| G469411 | NA | other | downstream | 1861032 | 7159458 ~ 7164572 (-) |
| G469361 | NA | other | downstream | 2229609 | 6794427 ~ 6795995 (-) |
| G469368 | LOC106593081 | other | downstream | 2260691 | 6763822 ~ 6764913 (-) |
| G472539 | NA | other | upstream | 1347720 | 10373852 ~ 10376077 (-) |
| G472576 | mpeg1 | other | upstream | 1450277 | 10476409 ~ 10479846 (-) |
| LOC110525252 | ccser1 | other | upstream | 2353395 | 11280815 ~ 11390675 (-) |
| G473930 | NA | other | upstream | 2575383 | 11601515 ~ 11601997 (-) |
| G474030 | NA | other | upstream | 2716070 | 11742202 ~ 11742758 (-) |
