Gene
RNA
| Item | Value |
|---|---|
| gene id | G471260 |
| gene name | LOC106585916 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 9117943 ~ 9137606 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU535794 | False | 962 | lncRNA | 0.43 | 2 | 9117943 | 9119002 |
| TU535795 | True | 800 | lncRNA | 0.45 | 3 | 9117943 | 9137606 |
9,112,000
9,116,000
9,120,000
9,124,000
9,128,000
9,132,000
9,136,000
9,140,000
9,144,000
9,148,000
9,152,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lmbrd2a | LOC106585919 | coding | downstream | 115270 | 8988891 ~ 9002673 (-) |
| LOC110525229 | LOC106585907 | coding | downstream | 221549 | 8894363 ~ 8896394 (-) |
| LOC110525230 | bri3bp | coding | downstream | 232790 | 8877792 ~ 8885153 (-) |
| aacs | aacs | coding | downstream | 246237 | 8814066 ~ 8871706 (-) |
| si:dkey-215k6.1 | LOC106585869 | coding | downstream | 358383 | 8316999 ~ 8759560 (-) |
| rtgdnf | rtgdnf | coding | upstream | 57027 | 9194633 ~ 9196133 (-) |
| si:ch73-72b7.1 | LOC106585820 | coding | upstream | 506885 | 9644491 ~ 9957507 (-) |
| stpg2 | stpg2 | coding | upstream | 1151410 | 10289016 ~ 10360380 (-) |
| smad4 | smad4 | coding | upstream | 1232363 | 10369969 ~ 10381469 (-) |
| elac1 | elac1 | coding | upstream | 1244020 | 10381626 ~ 10384394 (-) |
| G471272 | NA | non-coding | downstream | 4961 | 9111941 ~ 9112982 (-) |
| G471214 | NA | non-coding | downstream | 61191 | 8995198 ~ 9056752 (-) |
| G471231 | NA | non-coding | downstream | 91811 | 9025604 ~ 9026132 (-) |
| G471222 | NA | non-coding | downstream | 104001 | 9006925 ~ 9013942 (-) |
| G471217 | NA | non-coding | downstream | 124745 | 8992923 ~ 8993198 (-) |
| G471313 | NA | non-coding | upstream | 56230 | 9193836 ~ 9194606 (-) |
| G471328 | NA | non-coding | upstream | 81327 | 9218933 ~ 9219177 (-) |
| G471334 | NA | non-coding | upstream | 92843 | 9230449 ~ 9230765 (-) |
| G471356 | NA | non-coding | upstream | 129139 | 9266745 ~ 9269727 (-) |
| G471358 | NA | non-coding | upstream | 135190 | 9272796 ~ 9273539 (-) |
| G470834 | NA | other | downstream | 819522 | 8296569 ~ 8298421 (-) |
| G469751 | NA | other | downstream | 1463325 | 7652639 ~ 7654618 (-) |
| G469411 | NA | other | downstream | 1953371 | 7159458 ~ 7164572 (-) |
| G469361 | NA | other | downstream | 2321948 | 6794427 ~ 6795995 (-) |
| G469368 | LOC106593081 | other | downstream | 2353030 | 6763822 ~ 6764913 (-) |
| G472539 | NA | other | upstream | 1236246 | 10373852 ~ 10376077 (-) |
| G472576 | mpeg1 | other | upstream | 1338803 | 10476409 ~ 10479846 (-) |
| LOC110525252 | ccser1 | other | upstream | 2241921 | 11280815 ~ 11390675 (-) |
| G473930 | NA | other | upstream | 2463909 | 11601515 ~ 11601997 (-) |
| G474030 | NA | other | upstream | 2604596 | 11742202 ~ 11742758 (-) |
