G470780


Basic Information

Item Value
gene id G470780
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 9243494 ~ 9244846 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU535243
ccatgtgtatgtgaccaataacatccgctaaccaggtgtatgtgaccagtaacatccgctaaccaagtgtatgtgaccaataacatccgctaaccatgtgtatgtgaccagtaacatccgctaaccaagtgtatgtgaccagtaacatccgctaaccaagtgtatgtgaccagtaacatccgctaaccatgtgtatgtgaccagtaacatccgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU535243 True 214 lncRNA 0.45 2 9243494 9244846

Neighbor

gene id symbol gene type direction distance location
LOC110525222 ndc80 coding upstream 79676 9141512 ~ 9163818 (+)
LOC110525223 ndc80 coding upstream 108447 9118968 ~ 9135047 (+)
nipbla LOC105014587 coding upstream 124638 9076197 ~ 9118856 (+)
slc1a3a LOC106585918 coding upstream 186728 9022443 ~ 9056766 (+)
spef2 LOC106585910 coding upstream 259230 8937082 ~ 8984264 (+)
opn4xb opn4x1a coding downstream 70962 9315808 ~ 9345530 (+)
pdlim5a pdlim5 coding downstream 106300 9351146 ~ 9477870 (+)
bmpr1ba bmpr1b coding downstream 233261 9478107 ~ 9635081 (+)
LOC110525237 mex3c coding downstream 1115919 10360765 ~ 10365694 (+)
aptx LOC100136186 coding downstream 1140062 10384908 ~ 10386345 (+)
G470737 NA non-coding upstream 73623 9169569 ~ 9169871 (+)
G470725 NA non-coding upstream 117924 9125134 ~ 9125570 (+)
G470721 NA non-coding upstream 129024 9114041 ~ 9114470 (+)
G470712 NA non-coding upstream 174250 9068946 ~ 9069244 (+)
G470705 NA non-coding upstream 193053 9049130 ~ 9050441 (+)
LOC110525088 LOC106585913 non-coding downstream 23532 9228570 ~ 9273994 (+)
G471359 NA non-coding downstream 30178 9275024 ~ 9275684 (+)
G471363 NA non-coding downstream 31844 9276690 ~ 9276901 (+)
G471367 NA non-coding downstream 33840 9278686 ~ 9278973 (+)
G471381 NA non-coding downstream 44364 9289210 ~ 9292525 (+)
G470770 NA other upstream 17981 9223351 ~ 9225513 (+)
G470599 NA other upstream 432551 8809973 ~ 8810943 (+)
G470292 NA other upstream 1026220 8213280 ~ 8217274 (+)
LOC110525210 LOC106585898 other upstream 1599704 7608126 ~ 7652997 (+)
G469048 NA other upstream 1890916 7352186 ~ 7352578 (+)
G472364 NA other downstream 1035460 10280306 ~ 10281123 (+)
G473070 NA other downstream 2033492 11278338 ~ 11279265 (+)
G474321 NA other downstream 2943442 12188288 ~ 12190572 (+)
G474851 NA other downstream 3258914 12503760 ~ 12504119 (+)

Expression


Co-expression Network