Gene
RNA
| Item | Value |
|---|---|
| gene id | G471395 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 9298814 ~ 9299509 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU535966 | True | 696 | lncRNA | 0.37 | 1 | 9298814 | 9299509 |
9,296,800
9,297,200
9,297,600
9,298,000
9,298,400
9,298,800
9,299,200
9,299,600
9,300,000
9,300,400
9,300,800
9,301,200
9,301,600
9,302,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525088 | LOC106585913 | coding | upstream | 24820 | 9228570 ~ 9273994 (+) |
| LOC110525222 | ndc80 | coding | upstream | 134996 | 9141512 ~ 9163818 (+) |
| LOC110525223 | ndc80 | coding | upstream | 163767 | 9118968 ~ 9135047 (+) |
| nipbla | LOC105014587 | coding | upstream | 179958 | 9076197 ~ 9118856 (+) |
| slc1a3a | LOC106585918 | coding | upstream | 242048 | 9022443 ~ 9056766 (+) |
| opn4xb | opn4x1a | coding | downstream | 16299 | 9315808 ~ 9345530 (+) |
| pdlim5a | pdlim5 | coding | downstream | 51637 | 9351146 ~ 9477870 (+) |
| bmpr1ba | bmpr1b | coding | downstream | 178598 | 9478107 ~ 9635081 (+) |
| LOC110525237 | mex3c | coding | downstream | 1061256 | 10360765 ~ 10365694 (+) |
| aptx | LOC100136186 | coding | downstream | 1085399 | 10384908 ~ 10386345 (+) |
| G471391 | NA | non-coding | upstream | 940 | 9297652 ~ 9297874 (+) |
| G471390 | NA | non-coding | upstream | 1425 | 9297095 ~ 9297389 (+) |
| G471389 | NA | non-coding | upstream | 2098 | 9296477 ~ 9296716 (+) |
| G471388 | NA | non-coding | upstream | 2760 | 9295846 ~ 9296054 (+) |
| G471381 | NA | non-coding | upstream | 6289 | 9289210 ~ 9292525 (+) |
| G471398 | NA | non-coding | downstream | 1574 | 9301083 ~ 9301298 (+) |
| G471406 | NA | non-coding | downstream | 8199 | 9307708 ~ 9307986 (+) |
| G471410 | NA | non-coding | downstream | 11914 | 9311423 ~ 9311736 (+) |
| G471472 | NA | non-coding | downstream | 133145 | 9432654 ~ 9433340 (+) |
| G471483 | NA | non-coding | downstream | 173925 | 9473434 ~ 9473785 (+) |
| G470770 | NA | other | upstream | 73301 | 9223351 ~ 9225513 (+) |
| G470599 | NA | other | upstream | 487871 | 8809973 ~ 8810943 (+) |
| G470292 | NA | other | upstream | 1081540 | 8213280 ~ 8217274 (+) |
| LOC110525210 | LOC106585898 | other | upstream | 1655024 | 7608126 ~ 7652997 (+) |
| G472364 | NA | other | downstream | 980797 | 10280306 ~ 10281123 (+) |
| G473070 | NA | other | downstream | 1978829 | 11278338 ~ 11279265 (+) |
| G474321 | NA | other | downstream | 2888779 | 12188288 ~ 12190572 (+) |
| G474851 | NA | other | downstream | 3204251 | 12503760 ~ 12504119 (+) |
| G474949 | NA | other | downstream | 3412797 | 12712306 ~ 12713298 (+) |
