Gene
RNA
| Item | Value |
|---|---|
| gene id | G472340 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 10240443 ~ 10240739 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU537017 | True | 297 | lncRNA | 0.30 | 1 | 10240443 | 10240739 |
10,239,200
10,239,600
10,240,000
10,240,400
10,240,800
10,241,200
10,241,600
10,242,000
10,242,400
10,242,800
10,243,200
10,243,600
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch73-72b7.1 | LOC106585820 | coding | downstream | 282936 | 9644491 ~ 9957507 (-) |
| rtgdnf | rtgdnf | coding | downstream | 1044310 | 9194633 ~ 9196133 (-) |
| lmbrd2a | LOC106585919 | coding | downstream | 1237770 | 8988891 ~ 9002673 (-) |
| LOC110525229 | LOC106585907 | coding | downstream | 1344049 | 8894363 ~ 8896394 (-) |
| LOC110525230 | bri3bp | coding | downstream | 1355290 | 8877792 ~ 8885153 (-) |
| stpg2 | stpg2 | coding | upstream | 48277 | 10289016 ~ 10360380 (-) |
| smad4 | smad4 | coding | upstream | 129230 | 10369969 ~ 10381469 (-) |
| elac1 | elac1 | coding | upstream | 140887 | 10381626 ~ 10384394 (-) |
| me2 | me2 | coding | upstream | 145845 | 10386584 ~ 10414782 (-) |
| LOC110525243 | mapk4 | coding | upstream | 177639 | 10418378 ~ 10441341 (-) |
| G472322 | NA | non-coding | downstream | 15346 | 10224874 ~ 10225097 (-) |
| G472280 | NA | non-coding | downstream | 80714 | 10159400 ~ 10159729 (-) |
| G472277 | NA | non-coding | downstream | 86335 | 10153894 ~ 10154108 (-) |
| G472268 | NA | non-coding | downstream | 100158 | 10140081 ~ 10140285 (-) |
| G472200 | NA | non-coding | downstream | 118809 | 10121315 ~ 10121634 (-) |
| G472365 | NA | non-coding | upstream | 39546 | 10280285 ~ 10281008 (-) |
| G472368 | NA | non-coding | upstream | 42885 | 10283624 ~ 10288580 (-) |
| G472531 | NA | non-coding | upstream | 58160 | 10298899 ~ 10300504 (-) |
| G472573 | NA | non-coding | upstream | 159760 | 10400499 ~ 10464977 (-) |
| G472587 | NA | non-coding | upstream | 165989 | 10406728 ~ 10406989 (-) |
| G470834 | NA | other | downstream | 1942022 | 8296569 ~ 8298421 (-) |
| G469751 | NA | other | downstream | 2585825 | 7652639 ~ 7654618 (-) |
| G469411 | NA | other | downstream | 3075871 | 7159458 ~ 7164572 (-) |
| G469361 | NA | other | downstream | 3444448 | 6794427 ~ 6795995 (-) |
| G469368 | LOC106593081 | other | downstream | 3475530 | 6763822 ~ 6764913 (-) |
| G472539 | NA | other | upstream | 133113 | 10373852 ~ 10376077 (-) |
| G472576 | mpeg1 | other | upstream | 235670 | 10476409 ~ 10479846 (-) |
| LOC110525252 | ccser1 | other | upstream | 1138788 | 11280815 ~ 11390675 (-) |
| G473930 | NA | other | upstream | 1360776 | 11601515 ~ 11601997 (-) |
| G474030 | NA | other | upstream | 1501463 | 11742202 ~ 11742758 (-) |
