G472364


Basic Information

Item Value
gene id G472364
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 10280306 ~ 10281123 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU537053
gtcatgtattgtcatgttgtgtctttctgtcctttcctttcaccctgtctccctctgctggtcgtactaggttaccgtttctgtccctctttcccccagctgttccttgtcttctctgactacctcattcaccccttttcccacctgttccctttttccctctgattaggtccctatatctctctctgtttctgctcctgtccttgtcggattcttgtttgtgtgtctcatgcctgaaccagactatcatcgtgtttgctgcaaccttgtcctgtcctgtcggaatctacctgtccatctgagcccacgtgtgttcatcattaaagaaactctgtttgttaattcgcttttgggtcctcattcacgcacctgacagaagaatccgaccaagaatggacccagcgacttcggatcctctccactcagccgtcgagatccagggagcgatgctaggcagacacgagcaggaattgtctgctgctcgacatgccgttgagaccctggccacccaagtctccaacctcacagaacaggttcaccatctccgtctcgatccaccggccacttccagggctttcgaatctccggagcccagaatcaataacccgccgtgttactctggggagcccactgaatgccgctcgttcctcacccagtgtgatattgtgttttctctccagcccaacacttacgccaggagcactgctcgtgtcgcctacgtcatatctctccttactggacgggctcgtgagtggggcacggcaatctgggaggcaagggctgagtgtactaaccagtatcaggactttaaggaggag

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU537053 True 818 TUCP 0.52 1 10280306 10281123

Neighbor

gene id symbol gene type direction distance location
bmpr1ba bmpr1b coding upstream 645225 9478107 ~ 9635081 (+)
pdlim5a pdlim5 coding upstream 802436 9351146 ~ 9477870 (+)
opn4xb opn4x1a coding upstream 934776 9315808 ~ 9345530 (+)
LOC110525088 LOC106585913 coding upstream 1006312 9228570 ~ 9273994 (+)
LOC110525222 ndc80 coding upstream 1116488 9141512 ~ 9163818 (+)
LOC110525237 mex3c coding downstream 79642 10360765 ~ 10365694 (+)
aptx LOC100136186 coding downstream 103785 10384908 ~ 10386345 (+)
LOC110525245 LOC106585833 coding downstream 178514 10459637 ~ 10460645 (+)
mpeg1.1 mpeg1 coding downstream 195210 10476333 ~ 10479220 (+)
prf1.5 LOC106585834 coding downstream 199007 10480130 ~ 10484335 (+)
G472336 NA non-coding upstream 41606 10238268 ~ 10238700 (+)
G472323 NA non-coding upstream 54888 10225216 ~ 10225418 (+)
G472231 NA non-coding upstream 55773 10164997 ~ 10224533 (+)
G472203 NA non-coding upstream 157379 10122650 ~ 10122927 (+)
G472148 NA non-coding upstream 187885 10071088 ~ 10092421 (+)
G472367 NA non-coding downstream 2510 10283633 ~ 10288493 (+)
G472380 NA non-coding downstream 27209 10308332 ~ 10308825 (+)
G472428 NA non-coding downstream 96390 10377513 ~ 10377748 (+)
G472483 NA non-coding downstream 206829 10487952 ~ 10488157 (+)
G472487 NA non-coding downstream 210070 10491193 ~ 10491405 (+)
G470770 NA other upstream 1054793 9223351 ~ 9225513 (+)
G470599 NA other upstream 1469363 8809973 ~ 8810943 (+)
G470292 NA other upstream 2063032 8213280 ~ 8217274 (+)
LOC110525210 LOC106585898 other upstream 2636516 7608126 ~ 7652997 (+)
G473070 NA other downstream 997215 11278338 ~ 11279265 (+)
G474321 NA other downstream 1907165 12188288 ~ 12190572 (+)
G474851 NA other downstream 2222637 12503760 ~ 12504119 (+)
G474949 NA other downstream 2431183 12712306 ~ 12713298 (+)
G475692 NA other downstream 3032556 13313679 ~ 13313969 (+)

Expression


Co-expression Network