Gene
RNA
| Item | Value |
|---|---|
| gene id | G472725 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 10657951 ~ 10659561 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU537460 | True | 782 | lncRNA | 0.32 | 2 | 10657951 | 10659561 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525250 | hpgds | coding | upstream | 148822 | 10497758 ~ 10509129 (+) |
| prf1.5 | LOC106585834 | coding | upstream | 173616 | 10480130 ~ 10484335 (+) |
| mpeg1.1 | mpeg1 | coding | upstream | 178731 | 10476333 ~ 10479220 (+) |
| LOC110525245 | LOC106585833 | coding | upstream | 197306 | 10459637 ~ 10460645 (+) |
| aptx | LOC100136186 | coding | upstream | 271606 | 10384908 ~ 10386345 (+) |
| LOC110525261 | ap3s1 | coding | downstream | 878716 | 11538277 ~ 11561607 (+) |
| commd10 | comda | coding | downstream | 902906 | 11562467 ~ 11604688 (+) |
| LOC118965115 | NA | coding | downstream | 1085108 | 11744669 ~ 11744803 (+) |
| LOC110525262 | dmxl1 | coding | downstream | 1086452 | 11746013 ~ 11809089 (+) |
| LOC110525265 | LOC106585816 | coding | downstream | 1164798 | 11824359 ~ 11837872 (+) |
| G472675 | NA | non-coding | upstream | 70712 | 10585311 ~ 10587239 (+) |
| G472669 | NA | non-coding | upstream | 79570 | 10578143 ~ 10578381 (+) |
| G472487 | NA | non-coding | upstream | 166546 | 10491193 ~ 10491405 (+) |
| G472483 | NA | non-coding | upstream | 169794 | 10487952 ~ 10488157 (+) |
| G472428 | NA | non-coding | upstream | 280203 | 10377513 ~ 10377748 (+) |
| G472800 | NA | non-coding | downstream | 146463 | 10806024 ~ 10806342 (+) |
| G472811 | NA | non-coding | downstream | 165020 | 10824581 ~ 10829685 (+) |
| G473018 | NA | non-coding | downstream | 513616 | 11173177 ~ 11173692 (+) |
| G473046 | NA | non-coding | downstream | 562632 | 11222193 ~ 11223024 (+) |
| G473047 | NA | non-coding | downstream | 569928 | 11229489 ~ 11285481 (+) |
| G472364 | NA | other | upstream | 376828 | 10280306 ~ 10281123 (+) |
| LOC110525088 | LOC106585913 | other | upstream | 1383998 | 9228570 ~ 9273994 (+) |
| G470770 | NA | other | upstream | 1432438 | 9223351 ~ 9225513 (+) |
| G470599 | NA | other | upstream | 1847008 | 8809973 ~ 8810943 (+) |
| G470292 | NA | other | upstream | 2440677 | 8213280 ~ 8217274 (+) |
| G473070 | NA | other | downstream | 618777 | 11278338 ~ 11279265 (+) |
| G474321 | NA | other | downstream | 1528727 | 12188288 ~ 12190572 (+) |
| G474851 | NA | other | downstream | 1844199 | 12503760 ~ 12504119 (+) |
| G474949 | NA | other | downstream | 2052745 | 12712306 ~ 12713298 (+) |
| G475692 | NA | other | downstream | 2654118 | 13313679 ~ 13313969 (+) |
